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Large-scale computations on histology images reveal grade-differentiating parameters for breast cancer

BACKGROUND: Tumor classification is inexact and largely dependent on the qualitative pathological examination of the images of the tumor tissue slides. In this study, our aim was to develop an automated computational method to classify Hematoxylin and Eosin (H&E) stained tissue sections based on...

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Autores principales: Petushi, Sokol, Garcia, Fernando U, Haber, Marian M, Katsinis, Constantine, Tozeren, Aydin
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2006
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1634843/
https://www.ncbi.nlm.nih.gov/pubmed/17069651
http://dx.doi.org/10.1186/1471-2342-6-14
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author Petushi, Sokol
Garcia, Fernando U
Haber, Marian M
Katsinis, Constantine
Tozeren, Aydin
author_facet Petushi, Sokol
Garcia, Fernando U
Haber, Marian M
Katsinis, Constantine
Tozeren, Aydin
author_sort Petushi, Sokol
collection PubMed
description BACKGROUND: Tumor classification is inexact and largely dependent on the qualitative pathological examination of the images of the tumor tissue slides. In this study, our aim was to develop an automated computational method to classify Hematoxylin and Eosin (H&E) stained tissue sections based on cancer tissue texture features. METHODS: Image processing of histology slide images was used to detect and identify adipose tissue, extracellular matrix, morphologically distinct cell nuclei types, and the tubular architecture. The texture parameters derived from image analysis were then applied to classify images in a supervised classification scheme using histologic grade of a testing set as guidance. RESULTS: The histologic grade assigned by pathologists to invasive breast carcinoma images strongly correlated with both the presence and extent of cell nuclei with dispersed chromatin and the architecture, specifically the extent of presence of tubular cross sections. The two parameters that differentiated tumor grade found in this study were (1) the number density of cell nuclei with dispersed chromatin and (2) the number density of tubular cross sections identified through image processing as white blobs that were surrounded by a continuous string of cell nuclei. Classification based on subdivisions of a whole slide image containing a high concentration of cancer cell nuclei consistently agreed with the grade classification of the entire slide. CONCLUSION: The automated image analysis and classification presented in this study demonstrate the feasibility of developing clinically relevant classification of histology images based on micro- texture. This method provides pathologists an invaluable quantitative tool for evaluation of the components of the Nottingham system for breast tumor grading and avoid intra-observer variability thus increasing the consistency of the decision-making process.
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spelling pubmed-16348432006-11-07 Large-scale computations on histology images reveal grade-differentiating parameters for breast cancer Petushi, Sokol Garcia, Fernando U Haber, Marian M Katsinis, Constantine Tozeren, Aydin BMC Med Imaging Research Article BACKGROUND: Tumor classification is inexact and largely dependent on the qualitative pathological examination of the images of the tumor tissue slides. In this study, our aim was to develop an automated computational method to classify Hematoxylin and Eosin (H&E) stained tissue sections based on cancer tissue texture features. METHODS: Image processing of histology slide images was used to detect and identify adipose tissue, extracellular matrix, morphologically distinct cell nuclei types, and the tubular architecture. The texture parameters derived from image analysis were then applied to classify images in a supervised classification scheme using histologic grade of a testing set as guidance. RESULTS: The histologic grade assigned by pathologists to invasive breast carcinoma images strongly correlated with both the presence and extent of cell nuclei with dispersed chromatin and the architecture, specifically the extent of presence of tubular cross sections. The two parameters that differentiated tumor grade found in this study were (1) the number density of cell nuclei with dispersed chromatin and (2) the number density of tubular cross sections identified through image processing as white blobs that were surrounded by a continuous string of cell nuclei. Classification based on subdivisions of a whole slide image containing a high concentration of cancer cell nuclei consistently agreed with the grade classification of the entire slide. CONCLUSION: The automated image analysis and classification presented in this study demonstrate the feasibility of developing clinically relevant classification of histology images based on micro- texture. This method provides pathologists an invaluable quantitative tool for evaluation of the components of the Nottingham system for breast tumor grading and avoid intra-observer variability thus increasing the consistency of the decision-making process. BioMed Central 2006-10-27 /pmc/articles/PMC1634843/ /pubmed/17069651 http://dx.doi.org/10.1186/1471-2342-6-14 Text en Copyright © 2006 Petushi et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( (http://creativecommons.org/licenses/by/2.0) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Petushi, Sokol
Garcia, Fernando U
Haber, Marian M
Katsinis, Constantine
Tozeren, Aydin
Large-scale computations on histology images reveal grade-differentiating parameters for breast cancer
title Large-scale computations on histology images reveal grade-differentiating parameters for breast cancer
title_full Large-scale computations on histology images reveal grade-differentiating parameters for breast cancer
title_fullStr Large-scale computations on histology images reveal grade-differentiating parameters for breast cancer
title_full_unstemmed Large-scale computations on histology images reveal grade-differentiating parameters for breast cancer
title_short Large-scale computations on histology images reveal grade-differentiating parameters for breast cancer
title_sort large-scale computations on histology images reveal grade-differentiating parameters for breast cancer
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1634843/
https://www.ncbi.nlm.nih.gov/pubmed/17069651
http://dx.doi.org/10.1186/1471-2342-6-14
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