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Bioelectronic DNA detection of human papillomaviruses using eSensor™: a model system for detection of multiple pathogens

BACKGROUND: We used human papillomaviruses (HPV) as a model system to evaluate the utility of a nucleic acid, hybridization-based bioelectronic DNA detection platform (eSensor™) in identifying multiple pathogens. METHODS: Two chips were spotted with capture probes consisting of DNA oligonucleotide s...

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Autores principales: Vernon, Suzanne D, Farkas, Daniel H, Unger, Elizabeth R, Chan, Vivian, Miller, Donna L, Chen, Yin-Peng, Blackburn, Gary F, Reeves, William C
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2003
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC165582/
https://www.ncbi.nlm.nih.gov/pubmed/12814521
http://dx.doi.org/10.1186/1471-2334-3-12
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author Vernon, Suzanne D
Farkas, Daniel H
Unger, Elizabeth R
Chan, Vivian
Miller, Donna L
Chen, Yin-Peng
Blackburn, Gary F
Reeves, William C
author_facet Vernon, Suzanne D
Farkas, Daniel H
Unger, Elizabeth R
Chan, Vivian
Miller, Donna L
Chen, Yin-Peng
Blackburn, Gary F
Reeves, William C
author_sort Vernon, Suzanne D
collection PubMed
description BACKGROUND: We used human papillomaviruses (HPV) as a model system to evaluate the utility of a nucleic acid, hybridization-based bioelectronic DNA detection platform (eSensor™) in identifying multiple pathogens. METHODS: Two chips were spotted with capture probes consisting of DNA oligonucleotide sequences specific for HPV types. Electrically conductive signal probes were synthesized to be complementary to a distinct region of the amplified HPV target DNA. A portion of the HPV L1 region that was amplified by using consensus primers served as target DNA. The amplified target was mixed with a cocktail of signal probes and added to a cartridge containing a DNA chip to allow for hybridization with complementary capture probes. RESULTS: Two bioelectric chips were designed and successfully detected 86% of the HPV types contained in clinical samples. CONCLUSIONS: This model system demonstrates the potential of the eSensor platform for rapid and integrated detection of multiple pathogens.
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spelling pubmed-1655822003-07-16 Bioelectronic DNA detection of human papillomaviruses using eSensor™: a model system for detection of multiple pathogens Vernon, Suzanne D Farkas, Daniel H Unger, Elizabeth R Chan, Vivian Miller, Donna L Chen, Yin-Peng Blackburn, Gary F Reeves, William C BMC Infect Dis Research Article BACKGROUND: We used human papillomaviruses (HPV) as a model system to evaluate the utility of a nucleic acid, hybridization-based bioelectronic DNA detection platform (eSensor™) in identifying multiple pathogens. METHODS: Two chips were spotted with capture probes consisting of DNA oligonucleotide sequences specific for HPV types. Electrically conductive signal probes were synthesized to be complementary to a distinct region of the amplified HPV target DNA. A portion of the HPV L1 region that was amplified by using consensus primers served as target DNA. The amplified target was mixed with a cocktail of signal probes and added to a cartridge containing a DNA chip to allow for hybridization with complementary capture probes. RESULTS: Two bioelectric chips were designed and successfully detected 86% of the HPV types contained in clinical samples. CONCLUSIONS: This model system demonstrates the potential of the eSensor platform for rapid and integrated detection of multiple pathogens. BioMed Central 2003-06-19 /pmc/articles/PMC165582/ /pubmed/12814521 http://dx.doi.org/10.1186/1471-2334-3-12 Text en Copyright © 2003 Vernon et al; licensee BioMed Central Ltd. This is an Open Access article: verbatim copying and redistribution of this article are permitted in all media for any purpose, provided this notice is preserved along with the article's original URL.
spellingShingle Research Article
Vernon, Suzanne D
Farkas, Daniel H
Unger, Elizabeth R
Chan, Vivian
Miller, Donna L
Chen, Yin-Peng
Blackburn, Gary F
Reeves, William C
Bioelectronic DNA detection of human papillomaviruses using eSensor™: a model system for detection of multiple pathogens
title Bioelectronic DNA detection of human papillomaviruses using eSensor™: a model system for detection of multiple pathogens
title_full Bioelectronic DNA detection of human papillomaviruses using eSensor™: a model system for detection of multiple pathogens
title_fullStr Bioelectronic DNA detection of human papillomaviruses using eSensor™: a model system for detection of multiple pathogens
title_full_unstemmed Bioelectronic DNA detection of human papillomaviruses using eSensor™: a model system for detection of multiple pathogens
title_short Bioelectronic DNA detection of human papillomaviruses using eSensor™: a model system for detection of multiple pathogens
title_sort bioelectronic dna detection of human papillomaviruses using esensor™: a model system for detection of multiple pathogens
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC165582/
https://www.ncbi.nlm.nih.gov/pubmed/12814521
http://dx.doi.org/10.1186/1471-2334-3-12
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