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BeetleBase: the model organism database for Tribolium castaneum
BeetleBase () is an integrated resource for the Tribolium research community. The red flour beetle (Tribolium castaneum) is an important model organism for genetics, developmental biology, toxicology and comparative genomics, the genome of which has recently been sequenced. BeetleBase is constructed...
Autores principales: | , , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2007
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1669707/ https://www.ncbi.nlm.nih.gov/pubmed/17090595 http://dx.doi.org/10.1093/nar/gkl776 |
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author | Wang, Liangjiang Wang, Suzhi Li, Yonghua Paradesi, Martin S. R. Brown, Susan J. |
author_facet | Wang, Liangjiang Wang, Suzhi Li, Yonghua Paradesi, Martin S. R. Brown, Susan J. |
author_sort | Wang, Liangjiang |
collection | PubMed |
description | BeetleBase () is an integrated resource for the Tribolium research community. The red flour beetle (Tribolium castaneum) is an important model organism for genetics, developmental biology, toxicology and comparative genomics, the genome of which has recently been sequenced. BeetleBase is constructed to integrate the genomic sequence data with information about genes, mutants, genetic markers, expressed sequence tags and publications. BeetleBase uses the Chado data model and software components developed by the Generic Model Organism Database (GMOD) project. This strategy not only reduces the time required to develop the database query tools but also makes the data structure of BeetleBase compatible with that of other model organism databases. BeetleBase will be useful to the Tribolium research community for genome annotation as well as comparative genomics. |
format | Text |
id | pubmed-1669707 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2007 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-16697072007-02-22 BeetleBase: the model organism database for Tribolium castaneum Wang, Liangjiang Wang, Suzhi Li, Yonghua Paradesi, Martin S. R. Brown, Susan J. Nucleic Acids Res Articles BeetleBase () is an integrated resource for the Tribolium research community. The red flour beetle (Tribolium castaneum) is an important model organism for genetics, developmental biology, toxicology and comparative genomics, the genome of which has recently been sequenced. BeetleBase is constructed to integrate the genomic sequence data with information about genes, mutants, genetic markers, expressed sequence tags and publications. BeetleBase uses the Chado data model and software components developed by the Generic Model Organism Database (GMOD) project. This strategy not only reduces the time required to develop the database query tools but also makes the data structure of BeetleBase compatible with that of other model organism databases. BeetleBase will be useful to the Tribolium research community for genome annotation as well as comparative genomics. Oxford University Press 2007-01 2006-11-07 /pmc/articles/PMC1669707/ /pubmed/17090595 http://dx.doi.org/10.1093/nar/gkl776 Text en © 2006 The Author(s) This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Articles Wang, Liangjiang Wang, Suzhi Li, Yonghua Paradesi, Martin S. R. Brown, Susan J. BeetleBase: the model organism database for Tribolium castaneum |
title | BeetleBase: the model organism database for Tribolium castaneum |
title_full | BeetleBase: the model organism database for Tribolium castaneum |
title_fullStr | BeetleBase: the model organism database for Tribolium castaneum |
title_full_unstemmed | BeetleBase: the model organism database for Tribolium castaneum |
title_short | BeetleBase: the model organism database for Tribolium castaneum |
title_sort | beetlebase: the model organism database for tribolium castaneum |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1669707/ https://www.ncbi.nlm.nih.gov/pubmed/17090595 http://dx.doi.org/10.1093/nar/gkl776 |
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