DDBJ working on evaluation and classification of bacterial genes in INSDC

DNA Data Bank of Japan (DDBJ) () newly collected and released 12 927 184 entries or 13 787 688 598 bases in the period from July 2005 to June 2006. The released data contain honeybee expressed sequence tags (ESTs), re-examined and re-annotated complete genome data of Escherichia coli K-12 W3110, med...

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Detalles Bibliográficos
Autores principales: Sugawara, Hideaki, Abe, Takashi, Gojobori, Takashi, Tateno, Yoshio
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2007
Materias:
Articles
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1669713/
https://www.ncbi.nlm.nih.gov/pubmed/17108353
http://dx.doi.org/10.1093/nar/gkl908
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author Sugawara, Hideaki
Abe, Takashi
Gojobori, Takashi
Tateno, Yoshio
author_facet Sugawara, Hideaki
Abe, Takashi
Gojobori, Takashi
Tateno, Yoshio
author_sort Sugawara, Hideaki
collection PubMed
description DNA Data Bank of Japan (DDBJ) () newly collected and released 12 927 184 entries or 13 787 688 598 bases in the period from July 2005 to June 2006. The released data contain honeybee expressed sequence tags (ESTs), re-examined and re-annotated complete genome data of Escherichia coli K-12 W3110, medaka WGS and human MGA. We also systematically evaluated and classified the genes in the complete bacterial genomes submitted to the International Nucleotide Sequence Database Collaboration (INSDC, ) that is composed of DDBJ, EMBL Bank and GenBank. The examination and classification selected 557 000 genes as reliable ones among all the bacterial genes predicted by us.
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spelling pubmed-16697132007-02-22 DDBJ working on evaluation and classification of bacterial genes in INSDC Sugawara, Hideaki Abe, Takashi Gojobori, Takashi Tateno, Yoshio Nucleic Acids Res Articles DNA Data Bank of Japan (DDBJ) () newly collected and released 12 927 184 entries or 13 787 688 598 bases in the period from July 2005 to June 2006. The released data contain honeybee expressed sequence tags (ESTs), re-examined and re-annotated complete genome data of Escherichia coli K-12 W3110, medaka WGS and human MGA. We also systematically evaluated and classified the genes in the complete bacterial genomes submitted to the International Nucleotide Sequence Database Collaboration (INSDC, ) that is composed of DDBJ, EMBL Bank and GenBank. The examination and classification selected 557 000 genes as reliable ones among all the bacterial genes predicted by us. Oxford University Press 2007-01 2006-11-15 /pmc/articles/PMC1669713/ /pubmed/17108353 http://dx.doi.org/10.1093/nar/gkl908 Text en © 2006 The Author(s) This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Sugawara, Hideaki
Abe, Takashi
Gojobori, Takashi
Tateno, Yoshio
DDBJ working on evaluation and classification of bacterial genes in INSDC
title DDBJ working on evaluation and classification of bacterial genes in INSDC
title_full DDBJ working on evaluation and classification of bacterial genes in INSDC
title_fullStr DDBJ working on evaluation and classification of bacterial genes in INSDC
title_full_unstemmed DDBJ working on evaluation and classification of bacterial genes in INSDC
title_short DDBJ working on evaluation and classification of bacterial genes in INSDC
title_sort ddbj working on evaluation and classification of bacterial genes in insdc
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1669713/
https://www.ncbi.nlm.nih.gov/pubmed/17108353
http://dx.doi.org/10.1093/nar/gkl908
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