Cargando…

PlantQTL-GE: a database system for identifying candidate genes in rice and Arabidopsis by gene expression and QTL information

We have designed and implemented a web-based database system, called PlantQTL-GE, to facilitate quantitatine traits locus (QTL) based candidate gene identification and gene function analysis. We collected a large number of genes, gene expression information in microarray data and expressed sequence...

Descripción completa

Detalles Bibliográficos
Autores principales:	Zeng, Huazong, Luo, Lijun, Zhang, Weixiong, Zhou, Jie, Li, Zuofeng, Liu, Hongyan, Zhu, Tiansheng, Feng, Xiangqian, Zhong, Yang
Formato:	Texto
Lenguaje:	English
Publicado:	Oxford University Press 2007
Materias:	Articles
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1669735/ https://www.ncbi.nlm.nih.gov/pubmed/17142239 http://dx.doi.org/10.1093/nar/gkl814

Ejemplares similares

Using Crop Databases to Explore Phenotypes: From QTL to Candidate Genes
por: Brown, Anne V., et al.
Publicado: (2021)

Prioritizing candidate eQTL causal genes in Arabidopsis using RANDOM FORESTS
por: Hartanto, Margi, et al.
Publicado: (2022)

QTL Mapping and Identification of Candidate Genes for Heat Tolerance at the Flowering Stage in Rice
por: Chen, Lei, et al.
Publicado: (2021)

Fine mapping and candidate gene analysis of a major QTL for panicle structure in rice
por: Peng, Youlin, et al.
Publicado: (2014)

QTL Mapping and Candidate Gene Analysis for Seed Germination Response to Low Temperature in Rice
por: Kim, Nari, et al.
Publicado: (2022)

QTL MatchMaker: a multi-species quantitative trait loci (QTL) database and query system for annotation of genes and QTL
por: Star, Kremena V., et al.
Publicado: (2006)

An Efficient Strategy Combining SSR Markers- and Advanced QTL-seq-driven QTL Mapping Unravels Candidate Genes Regulating Grain Weight in Rice
por: Daware, Anurag, et al.
Publicado: (2016)

QTL and candidate genes associated with leaf anion concentrations in response to phosphate supply in Arabidopsis thaliana
por: El-Soda, Mohamed, et al.
Publicado: (2019)

Identification of a Major QTL and Validation of Related Genes for Tiller Angle in Rice Based on QTL Analysis
por: Zhao, Dan-Dan, et al.
Publicado: (2022)

QTL analysis for chalkiness of rice and fine mapping of a candidate gene for qACE9
por: Gao, Yang, et al.
Publicado: (2016)

Identification of Candidate Gene for Internode Length in Rice to Enhance Resistance to Lodging Using QTL Analysis
por: Zhao, Dan-Dan, et al.
Publicado: (2021)

QTL and QTL networks for cold tolerance at the reproductive stage detected using selective introgression in rice
por: Liang, Yuntao, et al.
Publicado: (2018)

AnimalQTLdb: a livestock QTL database tool set for positional QTL information mining and beyond
por: Hu, Zhi-Liang, et al.
Publicado: (2007)

QTL and candidate gene mapping for polyphenolic composition in apple fruit
por: Chagné, David, et al.
Publicado: (2012)

Serious limitations of the QTL/Microarray approach for QTL gene discovery
por: Verdugo, Ricardo A, et al.
Publicado: (2010)

QTL Mapping by Whole Genome Re-sequencing and Analysis of Candidate Genes for Nitrogen Use Efficiency in Rice
por: Yang, Xinghai, et al.
Publicado: (2017)

QTL mapping and candidate gene analysis of cadmium accumulation in polished rice by genome-wide association study
por: Pan, Xiaowu, et al.
Publicado: (2020)

Fine Mapping and Candidate Gene Analysis of Rice Grain Length QTL qGL9.1
por: Yang, Luomiao, et al.
Publicado: (2023)

Rapid Identification of QTL for Mesocotyl Length in Rice Through Combining QTL-seq and Genome-Wide Association Analysis
por: Wang, Yamei, et al.
Publicado: (2021)

Identification of a Major QTL and Candidate Gene Analysis of Salt Tolerance at the Bud Burst Stage in Rice (Oryza sativa L.) Using QTL-Seq and RNA-Seq
por: Lei, Lei, et al.
Publicado: (2020)

Deploying QTL-seq for rapid delineation of a potential candidate gene underlying major trait-associated QTL in chickpea
por: Das, Shouvik, et al.
Publicado: (2015)

A major QTL identification and candidate gene analysis of watermelon fruit cracking using QTL-seq and RNA-seq
por: Zhan, Yuanfeng, et al.
Publicado: (2023)

Identification of Salt Tolerance Related Candidate Genes in ‘Sea Rice 86’ at the Seedling and Reproductive Stages Using QTL-Seq and BSA-Seq
por: Gao, Qinmei, et al.
Publicado: (2023)

The Candidate Genes Underlying a Stably Expressed QTL for Low Temperature Germinability in Rice (Oryza sativa L.)
por: Yang, Tifeng, et al.
Publicado: (2020)

Understanding complex genetic architecture of rice grain weight through QTL-meta analysis and candidate gene identification
por: Anilkumar, C., et al.
Publicado: (2022)

Integration of QTL Mapping and Whole Genome Sequencing Identifies Candidate Genes for Alkalinity Tolerance in Rice (Oryza sativa)
por: Singh, Lovepreet, et al.
Publicado: (2022)

Genetic background- and environment-independent QTL and candidate gene identification of appearance quality in three MAGIC populations of rice
por: Chen, Huizhen, et al.
Publicado: (2022)

mQTL-seq delineates functionally relevant candidate gene harbouring a major QTL regulating pod number in chickpea
por: Das, Shouvik, et al.
Publicado: (2016)

QTL-Seq and Transcriptome Analysis Disclose Major QTL and Candidate Genes Controlling Leaf Size in Sesame (Sesamum indicum L.)
por: Sheng, Chen, et al.
Publicado: (2021)

QTL and candidate gene identification of the node of the first fruiting branch (NFFB) by QTL-seq in upland cotton (Gossypium hirsutum L.)
por: Zhang, Jingjing, et al.
Publicado: (2021)

Analysis of QTL DM4.1 for Downy Mildew Resistance in Cucumber Reveals Multiple subQTL: A Novel RLK as Candidate Gene for the Most Important subQTL
por: Berg, Jeroen A., et al.
Publicado: (2020)

QTL Analysis and Candidate Gene Mapping for the Polyphenol Content in Cider Apple
por: Verdu, Cindy F., et al.
Publicado: (2014)

Identification of candidate genes and mutations in QTL regions for immune responses in chicken
por: Siwek, M., et al.
Publicado: (2015)

Prior knowledge guided eQTL mapping for identifying candidate genes
por: Wang, Yunli, et al.
Publicado: (2016)

Prioritising candidate genes causing QTL using hierarchical orthologous groups
por: Warwick Vesztrocy, Alex, et al.
Publicado: (2018)

QTL Mapping and Candidate Gene Identification of Swollen Root Formation in Turnip
por: Wu, Yudi, et al.
Publicado: (2021)

Identification of QTL regions and candidate genes for growth and feed efficiency in broilers
por: Li, Wei, et al.
Publicado: (2021)

QTL and PACE analyses identify candidate genes for anthracnose resistance in tomato
por: Lopez-Ortiz, Carlos, et al.
Publicado: (2023)

RiceGeneThresher: a web-based application for mining genes underlying QTL in rice genome
por: Thongjuea, Supat, et al.
Publicado: (2009)

solQTL: a tool for QTL analysis, visualization and linking to genomes at SGN database
por: Tecle, Isaak Y, et al.
Publicado: (2010)

Cannot write session to /tmp/vufind_sessions/sess_l53u74mmp82mtom528j2097evs