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SuperHapten: a comprehensive database for small immunogenic compounds

The immune system protects organisms from foreign proteins, peptide epitopes and a multitude of chemical compounds. Among these, haptens are small molecules, eliciting an immune response when conjugated with carrier molecules. Known haptens are xenobiotics or natural compounds, which can induce a nu...

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Detalles Bibliográficos
Autores principales: Günther, Stefan, Hempel, Dorothea, Dunkel, Mathias, Rother, Kristian, Preissner, Robert
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2007
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1669746/
https://www.ncbi.nlm.nih.gov/pubmed/17090587
http://dx.doi.org/10.1093/nar/gkl849
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author Günther, Stefan
Hempel, Dorothea
Dunkel, Mathias
Rother, Kristian
Preissner, Robert
author_facet Günther, Stefan
Hempel, Dorothea
Dunkel, Mathias
Rother, Kristian
Preissner, Robert
author_sort Günther, Stefan
collection PubMed
description The immune system protects organisms from foreign proteins, peptide epitopes and a multitude of chemical compounds. Among these, haptens are small molecules, eliciting an immune response when conjugated with carrier molecules. Known haptens are xenobiotics or natural compounds, which can induce a number of autoimmune diseases like contact dermatitis or asthma. Furthermore, haptens are utilized in the development of biosensors, immunomodulators and new vaccines. Although hapten-induced allergies account for 6–10% of all adverse drug effects, the understanding of the correlation between structural and haptenic properties is rather fragmentary. We have developed a manually curated hapten database, SuperHapten, integrating information from literature and web resources. The current version of the database compiles 2D/3D structures, physicochemical properties and references for about 7500 haptens and 25,000 synonyms. The commercial availability is documented for about 6300 haptens and 450 related antibodies, enabling experimental approaches on cross-reactivity. The haptens are classified regarding their origin: pesticides, herbicides, insecticides, drugs, natural compounds, etc. Queries allow identification of haptens and associated antibodies according to functional class, carrier protein, chemical scaffold, composition or structural similarity. SuperHapten is available online at .
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spelling pubmed-16697462007-02-22 SuperHapten: a comprehensive database for small immunogenic compounds Günther, Stefan Hempel, Dorothea Dunkel, Mathias Rother, Kristian Preissner, Robert Nucleic Acids Res Articles The immune system protects organisms from foreign proteins, peptide epitopes and a multitude of chemical compounds. Among these, haptens are small molecules, eliciting an immune response when conjugated with carrier molecules. Known haptens are xenobiotics or natural compounds, which can induce a number of autoimmune diseases like contact dermatitis or asthma. Furthermore, haptens are utilized in the development of biosensors, immunomodulators and new vaccines. Although hapten-induced allergies account for 6–10% of all adverse drug effects, the understanding of the correlation between structural and haptenic properties is rather fragmentary. We have developed a manually curated hapten database, SuperHapten, integrating information from literature and web resources. The current version of the database compiles 2D/3D structures, physicochemical properties and references for about 7500 haptens and 25,000 synonyms. The commercial availability is documented for about 6300 haptens and 450 related antibodies, enabling experimental approaches on cross-reactivity. The haptens are classified regarding their origin: pesticides, herbicides, insecticides, drugs, natural compounds, etc. Queries allow identification of haptens and associated antibodies according to functional class, carrier protein, chemical scaffold, composition or structural similarity. SuperHapten is available online at . Oxford University Press 2007-01 2006-11-07 /pmc/articles/PMC1669746/ /pubmed/17090587 http://dx.doi.org/10.1093/nar/gkl849 Text en © 2006 The Author(s) This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Günther, Stefan
Hempel, Dorothea
Dunkel, Mathias
Rother, Kristian
Preissner, Robert
SuperHapten: a comprehensive database for small immunogenic compounds
title SuperHapten: a comprehensive database for small immunogenic compounds
title_full SuperHapten: a comprehensive database for small immunogenic compounds
title_fullStr SuperHapten: a comprehensive database for small immunogenic compounds
title_full_unstemmed SuperHapten: a comprehensive database for small immunogenic compounds
title_short SuperHapten: a comprehensive database for small immunogenic compounds
title_sort superhapten: a comprehensive database for small immunogenic compounds
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1669746/
https://www.ncbi.nlm.nih.gov/pubmed/17090587
http://dx.doi.org/10.1093/nar/gkl849
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