The ribosomal database project (RDP-II): introducing myRDP space and quality controlled public data

Substantial new features have been implemented at the Ribosomal Database Project in response to the increased importance of high-throughput rRNA sequence analysis in microbial ecology and related disciplines. The most important changes include quality analysis, including chimera detection, for all a...

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Detalles Bibliográficos
Autores principales: Cole, J. R., Chai, B., Farris, R. J., Wang, Q., Kulam-Syed-Mohideen, A. S., McGarrell, D. M., Bandela, A. M., Cardenas, E., Garrity, G. M., Tiedje, J. M.
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2007
Materias:
Articles
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1669760/
https://www.ncbi.nlm.nih.gov/pubmed/17090583
http://dx.doi.org/10.1093/nar/gkl889
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author Cole, J. R.
Chai, B.
Farris, R. J.
Wang, Q.
Kulam-Syed-Mohideen, A. S.
McGarrell, D. M.
Bandela, A. M.
Cardenas, E.
Garrity, G. M.
Tiedje, J. M.
author_facet Cole, J. R.
Chai, B.
Farris, R. J.
Wang, Q.
Kulam-Syed-Mohideen, A. S.
McGarrell, D. M.
Bandela, A. M.
Cardenas, E.
Garrity, G. M.
Tiedje, J. M.
author_sort Cole, J. R.
collection PubMed
description Substantial new features have been implemented at the Ribosomal Database Project in response to the increased importance of high-throughput rRNA sequence analysis in microbial ecology and related disciplines. The most important changes include quality analysis, including chimera detection, for all available rRNA sequences and the introduction of myRDP Space, a new web component designed to help researchers place their own data in context with the RDP's data. In addition, new video tutorials describe how to use RDP features. Details about RDP data and analytical functions can be found at the RDP-II website ().
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spelling pubmed-16697602007-02-22 The ribosomal database project (RDP-II): introducing myRDP space and quality controlled public data Cole, J. R. Chai, B. Farris, R. J. Wang, Q. Kulam-Syed-Mohideen, A. S. McGarrell, D. M. Bandela, A. M. Cardenas, E. Garrity, G. M. Tiedje, J. M. Nucleic Acids Res Articles Substantial new features have been implemented at the Ribosomal Database Project in response to the increased importance of high-throughput rRNA sequence analysis in microbial ecology and related disciplines. The most important changes include quality analysis, including chimera detection, for all available rRNA sequences and the introduction of myRDP Space, a new web component designed to help researchers place their own data in context with the RDP's data. In addition, new video tutorials describe how to use RDP features. Details about RDP data and analytical functions can be found at the RDP-II website (). Oxford University Press 2007-01 2006-11-07 /pmc/articles/PMC1669760/ /pubmed/17090583 http://dx.doi.org/10.1093/nar/gkl889 Text en © 2006 The Author(s) This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Cole, J. R.
Chai, B.
Farris, R. J.
Wang, Q.
Kulam-Syed-Mohideen, A. S.
McGarrell, D. M.
Bandela, A. M.
Cardenas, E.
Garrity, G. M.
Tiedje, J. M.
The ribosomal database project (RDP-II): introducing myRDP space and quality controlled public data
title The ribosomal database project (RDP-II): introducing myRDP space and quality controlled public data
title_full The ribosomal database project (RDP-II): introducing myRDP space and quality controlled public data
title_fullStr The ribosomal database project (RDP-II): introducing myRDP space and quality controlled public data
title_full_unstemmed The ribosomal database project (RDP-II): introducing myRDP space and quality controlled public data
title_short The ribosomal database project (RDP-II): introducing myRDP space and quality controlled public data
title_sort ribosomal database project (rdp-ii): introducing myrdp space and quality controlled public data
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1669760/
https://www.ncbi.nlm.nih.gov/pubmed/17090583
http://dx.doi.org/10.1093/nar/gkl889
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