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IntAct—open source resource for molecular interaction data

IntAct is an open source database and software suite for modeling, storing and analyzing molecular interaction data. The data available in the database originates entirely from published literature and is manually annotated by expert biologists to a high level of detail, including experimental metho...

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Detalles Bibliográficos
Autores principales: Kerrien, S., Alam-Faruque, Y., Aranda, B., Bancarz, I., Bridge, A., Derow, C., Dimmer, E., Feuermann, M., Friedrichsen, A., Huntley, R., Kohler, C., Khadake, J., Leroy, C., Liban, A., Lieftink, C., Montecchi-Palazzi, L., Orchard, S., Risse, J., Robbe, K., Roechert, B., Thorneycroft, D., Zhang, Y., Apweiler, R., Hermjakob, H.
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2007
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1751531/
https://www.ncbi.nlm.nih.gov/pubmed/17145710
http://dx.doi.org/10.1093/nar/gkl958
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author Kerrien, S.
Alam-Faruque, Y.
Aranda, B.
Bancarz, I.
Bridge, A.
Derow, C.
Dimmer, E.
Feuermann, M.
Friedrichsen, A.
Huntley, R.
Kohler, C.
Khadake, J.
Leroy, C.
Liban, A.
Lieftink, C.
Montecchi-Palazzi, L.
Orchard, S.
Risse, J.
Robbe, K.
Roechert, B.
Thorneycroft, D.
Zhang, Y.
Apweiler, R.
Hermjakob, H.
author_facet Kerrien, S.
Alam-Faruque, Y.
Aranda, B.
Bancarz, I.
Bridge, A.
Derow, C.
Dimmer, E.
Feuermann, M.
Friedrichsen, A.
Huntley, R.
Kohler, C.
Khadake, J.
Leroy, C.
Liban, A.
Lieftink, C.
Montecchi-Palazzi, L.
Orchard, S.
Risse, J.
Robbe, K.
Roechert, B.
Thorneycroft, D.
Zhang, Y.
Apweiler, R.
Hermjakob, H.
author_sort Kerrien, S.
collection PubMed
description IntAct is an open source database and software suite for modeling, storing and analyzing molecular interaction data. The data available in the database originates entirely from published literature and is manually annotated by expert biologists to a high level of detail, including experimental methods, conditions and interacting domains. The database features over 126 000 binary interactions extracted from over 2100 scientific publications and makes extensive use of controlled vocabularies. The web site provides tools allowing users to search, visualize and download data from the repository. IntAct supports and encourages local installations as well as direct data submission and curation collaborations. IntAct source code and data are freely available from .
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spelling pubmed-17515312007-02-22 IntAct—open source resource for molecular interaction data Kerrien, S. Alam-Faruque, Y. Aranda, B. Bancarz, I. Bridge, A. Derow, C. Dimmer, E. Feuermann, M. Friedrichsen, A. Huntley, R. Kohler, C. Khadake, J. Leroy, C. Liban, A. Lieftink, C. Montecchi-Palazzi, L. Orchard, S. Risse, J. Robbe, K. Roechert, B. Thorneycroft, D. Zhang, Y. Apweiler, R. Hermjakob, H. Nucleic Acids Res Articles IntAct is an open source database and software suite for modeling, storing and analyzing molecular interaction data. The data available in the database originates entirely from published literature and is manually annotated by expert biologists to a high level of detail, including experimental methods, conditions and interacting domains. The database features over 126 000 binary interactions extracted from over 2100 scientific publications and makes extensive use of controlled vocabularies. The web site provides tools allowing users to search, visualize and download data from the repository. IntAct supports and encourages local installations as well as direct data submission and curation collaborations. IntAct source code and data are freely available from . Oxford University Press 2007-01 2006-12-01 /pmc/articles/PMC1751531/ /pubmed/17145710 http://dx.doi.org/10.1093/nar/gkl958 Text en © 2006 The Author(s) This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Kerrien, S.
Alam-Faruque, Y.
Aranda, B.
Bancarz, I.
Bridge, A.
Derow, C.
Dimmer, E.
Feuermann, M.
Friedrichsen, A.
Huntley, R.
Kohler, C.
Khadake, J.
Leroy, C.
Liban, A.
Lieftink, C.
Montecchi-Palazzi, L.
Orchard, S.
Risse, J.
Robbe, K.
Roechert, B.
Thorneycroft, D.
Zhang, Y.
Apweiler, R.
Hermjakob, H.
IntAct—open source resource for molecular interaction data
title IntAct—open source resource for molecular interaction data
title_full IntAct—open source resource for molecular interaction data
title_fullStr IntAct—open source resource for molecular interaction data
title_full_unstemmed IntAct—open source resource for molecular interaction data
title_short IntAct—open source resource for molecular interaction data
title_sort intact—open source resource for molecular interaction data
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1751531/
https://www.ncbi.nlm.nih.gov/pubmed/17145710
http://dx.doi.org/10.1093/nar/gkl958
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