Ensembl 2007

The Ensembl () project provides a comprehensive and integrated source of annotation of chordate genome sequences. Over the past year the number of genomes available from Ensembl has increased from 15 to 33, with the addition of sites for the mammalian genomes of elephant, rabbit, armadillo, tenrec,...

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Autores principales: Hubbard, T. J. P., Aken, B. L., Beal, K., Ballester, B., Caccamo, M., Chen, Y., Clarke, L., Coates, G., Cunningham, F., Cutts, T., Down, T., Dyer, S. C., Fitzgerald, S., Fernandez-Banet, J., Graf, S., Haider, S., Hammond, M., Herrero, J., Holland, R., Howe, K., Johnson, N., Kahari, A., Keefe, D., Kokocinski, F., Kulesha, E., Lawson, D., Longden, I., Melsopp, C., Megy, K., Meidl, P., Ouverdin, B., Parker, A., Prlic, A., Rice, S., Rios, D., Schuster, M., Sealy, I., Severin, J., Slater, G., Smedley, D., Spudich, G., Trevanion, S., Vilella, A., Vogel, J., White, S., Wood, M., Cox, T., Curwen, V., Durbin, R., Fernandez-Suarez, X. M., Flicek, P., Kasprzyk, A., Proctor, G., Searle, S., Smith, J., Ureta-Vidal, A., Birney, E.
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2007
Materias:
Articles
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1761443/
https://www.ncbi.nlm.nih.gov/pubmed/17148474
http://dx.doi.org/10.1093/nar/gkl996
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author Hubbard, T. J. P.
Aken, B. L.
Beal, K.
Ballester, B.
Caccamo, M.
Chen, Y.
Clarke, L.
Coates, G.
Cunningham, F.
Cutts, T.
Down, T.
Dyer, S. C.
Fitzgerald, S.
Fernandez-Banet, J.
Graf, S.
Haider, S.
Hammond, M.
Herrero, J.
Holland, R.
Howe, K.
Howe, K.
Johnson, N.
Kahari, A.
Keefe, D.
Kokocinski, F.
Kulesha, E.
Lawson, D.
Longden, I.
Melsopp, C.
Megy, K.
Meidl, P.
Ouverdin, B.
Parker, A.
Prlic, A.
Rice, S.
Rios, D.
Schuster, M.
Sealy, I.
Severin, J.
Slater, G.
Smedley, D.
Spudich, G.
Trevanion, S.
Vilella, A.
Vogel, J.
White, S.
Wood, M.
Cox, T.
Curwen, V.
Durbin, R.
Fernandez-Suarez, X. M.
Flicek, P.
Kasprzyk, A.
Proctor, G.
Searle, S.
Smith, J.
Ureta-Vidal, A.
Birney, E.
author_facet Hubbard, T. J. P.
Aken, B. L.
Beal, K.
Ballester, B.
Caccamo, M.
Chen, Y.
Clarke, L.
Coates, G.
Cunningham, F.
Cutts, T.
Down, T.
Dyer, S. C.
Fitzgerald, S.
Fernandez-Banet, J.
Graf, S.
Haider, S.
Hammond, M.
Herrero, J.
Holland, R.
Howe, K.
Howe, K.
Johnson, N.
Kahari, A.
Keefe, D.
Kokocinski, F.
Kulesha, E.
Lawson, D.
Longden, I.
Melsopp, C.
Megy, K.
Meidl, P.
Ouverdin, B.
Parker, A.
Prlic, A.
Rice, S.
Rios, D.
Schuster, M.
Sealy, I.
Severin, J.
Slater, G.
Smedley, D.
Spudich, G.
Trevanion, S.
Vilella, A.
Vogel, J.
White, S.
Wood, M.
Cox, T.
Curwen, V.
Durbin, R.
Fernandez-Suarez, X. M.
Flicek, P.
Kasprzyk, A.
Proctor, G.
Searle, S.
Smith, J.
Ureta-Vidal, A.
Birney, E.
author_sort Hubbard, T. J. P.
collection PubMed
description The Ensembl () project provides a comprehensive and integrated source of annotation of chordate genome sequences. Over the past year the number of genomes available from Ensembl has increased from 15 to 33, with the addition of sites for the mammalian genomes of elephant, rabbit, armadillo, tenrec, platypus, pig, cat, bush baby, common shrew, microbat and european hedgehog; the fish genomes of stickleback and medaka and the second example of the genomes of the sea squirt (Ciona savignyi) and the mosquito (Aedes aegypti). Some of the major features added during the year include the first complete gene sets for genomes with low-sequence coverage, the introduction of new strain variation data and the introduction of new orthology/paralog annotations based on gene trees.
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spelling pubmed-17614432007-02-22 Ensembl 2007 Hubbard, T. J. P. Aken, B. L. Beal, K. Ballester, B. Caccamo, M. Chen, Y. Clarke, L. Coates, G. Cunningham, F. Cutts, T. Down, T. Dyer, S. C. Fitzgerald, S. Fernandez-Banet, J. Graf, S. Haider, S. Hammond, M. Herrero, J. Holland, R. Howe, K. Howe, K. Johnson, N. Kahari, A. Keefe, D. Kokocinski, F. Kulesha, E. Lawson, D. Longden, I. Melsopp, C. Megy, K. Meidl, P. Ouverdin, B. Parker, A. Prlic, A. Rice, S. Rios, D. Schuster, M. Sealy, I. Severin, J. Slater, G. Smedley, D. Spudich, G. Trevanion, S. Vilella, A. Vogel, J. White, S. Wood, M. Cox, T. Curwen, V. Durbin, R. Fernandez-Suarez, X. M. Flicek, P. Kasprzyk, A. Proctor, G. Searle, S. Smith, J. Ureta-Vidal, A. Birney, E. Nucleic Acids Res Articles The Ensembl () project provides a comprehensive and integrated source of annotation of chordate genome sequences. Over the past year the number of genomes available from Ensembl has increased from 15 to 33, with the addition of sites for the mammalian genomes of elephant, rabbit, armadillo, tenrec, platypus, pig, cat, bush baby, common shrew, microbat and european hedgehog; the fish genomes of stickleback and medaka and the second example of the genomes of the sea squirt (Ciona savignyi) and the mosquito (Aedes aegypti). Some of the major features added during the year include the first complete gene sets for genomes with low-sequence coverage, the introduction of new strain variation data and the introduction of new orthology/paralog annotations based on gene trees. Oxford University Press 2007-01 2006-12-05 /pmc/articles/PMC1761443/ /pubmed/17148474 http://dx.doi.org/10.1093/nar/gkl996 Text en © 2006 The Author(s) This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Hubbard, T. J. P.
Aken, B. L.
Beal, K.
Ballester, B.
Caccamo, M.
Chen, Y.
Clarke, L.
Coates, G.
Cunningham, F.
Cutts, T.
Down, T.
Dyer, S. C.
Fitzgerald, S.
Fernandez-Banet, J.
Graf, S.
Haider, S.
Hammond, M.
Herrero, J.
Holland, R.
Howe, K.
Howe, K.
Johnson, N.
Kahari, A.
Keefe, D.
Kokocinski, F.
Kulesha, E.
Lawson, D.
Longden, I.
Melsopp, C.
Megy, K.
Meidl, P.
Ouverdin, B.
Parker, A.
Prlic, A.
Rice, S.
Rios, D.
Schuster, M.
Sealy, I.
Severin, J.
Slater, G.
Smedley, D.
Spudich, G.
Trevanion, S.
Vilella, A.
Vogel, J.
White, S.
Wood, M.
Cox, T.
Curwen, V.
Durbin, R.
Fernandez-Suarez, X. M.
Flicek, P.
Kasprzyk, A.
Proctor, G.
Searle, S.
Smith, J.
Ureta-Vidal, A.
Birney, E.
Ensembl 2007
title Ensembl 2007
title_full Ensembl 2007
title_fullStr Ensembl 2007
title_full_unstemmed Ensembl 2007
title_short Ensembl 2007
title_sort ensembl 2007
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1761443/
https://www.ncbi.nlm.nih.gov/pubmed/17148474
http://dx.doi.org/10.1093/nar/gkl996
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