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Primate-specific evolution of an LDLR enhancer

BACKGROUND: Sequence changes in regulatory regions have often been invoked to explain phenotypic divergence among species, but molecular examples of this have been difficult to obtain. RESULTS: In this study we identified an anthropoid primate-specific sequence element that contributed to the regula...

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Autores principales: Wang, Qian-fei, Prabhakar, Shyam, Wang, Qianben, Moses, Alan M, Chanan, Sumita, Brown, Myles, Eisen, Michael B, Cheng, Jan-Fang, Rubin, Edward M, Boffelli, Dario
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2006
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1779597/
https://www.ncbi.nlm.nih.gov/pubmed/16884525
http://dx.doi.org/10.1186/gb-2006-7-8-r68
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author Wang, Qian-fei
Prabhakar, Shyam
Wang, Qianben
Moses, Alan M
Chanan, Sumita
Brown, Myles
Eisen, Michael B
Cheng, Jan-Fang
Rubin, Edward M
Boffelli, Dario
author_facet Wang, Qian-fei
Prabhakar, Shyam
Wang, Qianben
Moses, Alan M
Chanan, Sumita
Brown, Myles
Eisen, Michael B
Cheng, Jan-Fang
Rubin, Edward M
Boffelli, Dario
author_sort Wang, Qian-fei
collection PubMed
description BACKGROUND: Sequence changes in regulatory regions have often been invoked to explain phenotypic divergence among species, but molecular examples of this have been difficult to obtain. RESULTS: In this study we identified an anthropoid primate-specific sequence element that contributed to the regulatory evolution of the low-density lipoprotein receptor. Using a combination of close and distant species genomic sequence comparisons coupled with in vivo and in vitro studies, we found that a functional cholesterol-sensing sequence motif arose and was fixed within a pre-existing enhancer in the common ancestor of anthropoid primates. CONCLUSION: Our study demonstrates one molecular mechanism by which ancestral mammalian regulatory elements can evolve to perform new functions in the primate lineage leading to human.
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spelling pubmed-17795972007-01-19 Primate-specific evolution of an LDLR enhancer Wang, Qian-fei Prabhakar, Shyam Wang, Qianben Moses, Alan M Chanan, Sumita Brown, Myles Eisen, Michael B Cheng, Jan-Fang Rubin, Edward M Boffelli, Dario Genome Biol Research BACKGROUND: Sequence changes in regulatory regions have often been invoked to explain phenotypic divergence among species, but molecular examples of this have been difficult to obtain. RESULTS: In this study we identified an anthropoid primate-specific sequence element that contributed to the regulatory evolution of the low-density lipoprotein receptor. Using a combination of close and distant species genomic sequence comparisons coupled with in vivo and in vitro studies, we found that a functional cholesterol-sensing sequence motif arose and was fixed within a pre-existing enhancer in the common ancestor of anthropoid primates. CONCLUSION: Our study demonstrates one molecular mechanism by which ancestral mammalian regulatory elements can evolve to perform new functions in the primate lineage leading to human. BioMed Central 2006 2006-08-02 /pmc/articles/PMC1779597/ /pubmed/16884525 http://dx.doi.org/10.1186/gb-2006-7-8-r68 Text en Copyright © 2006 Wang et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an open access article distributed under the terms of the Creative Commons Attribution License ( (http://creativecommons.org/licenses/by/2.0) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research
Wang, Qian-fei
Prabhakar, Shyam
Wang, Qianben
Moses, Alan M
Chanan, Sumita
Brown, Myles
Eisen, Michael B
Cheng, Jan-Fang
Rubin, Edward M
Boffelli, Dario
Primate-specific evolution of an LDLR enhancer
title Primate-specific evolution of an LDLR enhancer
title_full Primate-specific evolution of an LDLR enhancer
title_fullStr Primate-specific evolution of an LDLR enhancer
title_full_unstemmed Primate-specific evolution of an LDLR enhancer
title_short Primate-specific evolution of an LDLR enhancer
title_sort primate-specific evolution of an ldlr enhancer
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1779597/
https://www.ncbi.nlm.nih.gov/pubmed/16884525
http://dx.doi.org/10.1186/gb-2006-7-8-r68
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