Cargando…
Primate-specific evolution of an LDLR enhancer
BACKGROUND: Sequence changes in regulatory regions have often been invoked to explain phenotypic divergence among species, but molecular examples of this have been difficult to obtain. RESULTS: In this study we identified an anthropoid primate-specific sequence element that contributed to the regula...
Autores principales: | , , , , , , , , , |
---|---|
Formato: | Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2006
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1779597/ https://www.ncbi.nlm.nih.gov/pubmed/16884525 http://dx.doi.org/10.1186/gb-2006-7-8-r68 |
_version_ | 1782131814010191872 |
---|---|
author | Wang, Qian-fei Prabhakar, Shyam Wang, Qianben Moses, Alan M Chanan, Sumita Brown, Myles Eisen, Michael B Cheng, Jan-Fang Rubin, Edward M Boffelli, Dario |
author_facet | Wang, Qian-fei Prabhakar, Shyam Wang, Qianben Moses, Alan M Chanan, Sumita Brown, Myles Eisen, Michael B Cheng, Jan-Fang Rubin, Edward M Boffelli, Dario |
author_sort | Wang, Qian-fei |
collection | PubMed |
description | BACKGROUND: Sequence changes in regulatory regions have often been invoked to explain phenotypic divergence among species, but molecular examples of this have been difficult to obtain. RESULTS: In this study we identified an anthropoid primate-specific sequence element that contributed to the regulatory evolution of the low-density lipoprotein receptor. Using a combination of close and distant species genomic sequence comparisons coupled with in vivo and in vitro studies, we found that a functional cholesterol-sensing sequence motif arose and was fixed within a pre-existing enhancer in the common ancestor of anthropoid primates. CONCLUSION: Our study demonstrates one molecular mechanism by which ancestral mammalian regulatory elements can evolve to perform new functions in the primate lineage leading to human. |
format | Text |
id | pubmed-1779597 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2006 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-17795972007-01-19 Primate-specific evolution of an LDLR enhancer Wang, Qian-fei Prabhakar, Shyam Wang, Qianben Moses, Alan M Chanan, Sumita Brown, Myles Eisen, Michael B Cheng, Jan-Fang Rubin, Edward M Boffelli, Dario Genome Biol Research BACKGROUND: Sequence changes in regulatory regions have often been invoked to explain phenotypic divergence among species, but molecular examples of this have been difficult to obtain. RESULTS: In this study we identified an anthropoid primate-specific sequence element that contributed to the regulatory evolution of the low-density lipoprotein receptor. Using a combination of close and distant species genomic sequence comparisons coupled with in vivo and in vitro studies, we found that a functional cholesterol-sensing sequence motif arose and was fixed within a pre-existing enhancer in the common ancestor of anthropoid primates. CONCLUSION: Our study demonstrates one molecular mechanism by which ancestral mammalian regulatory elements can evolve to perform new functions in the primate lineage leading to human. BioMed Central 2006 2006-08-02 /pmc/articles/PMC1779597/ /pubmed/16884525 http://dx.doi.org/10.1186/gb-2006-7-8-r68 Text en Copyright © 2006 Wang et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an open access article distributed under the terms of the Creative Commons Attribution License ( (http://creativecommons.org/licenses/by/2.0) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Wang, Qian-fei Prabhakar, Shyam Wang, Qianben Moses, Alan M Chanan, Sumita Brown, Myles Eisen, Michael B Cheng, Jan-Fang Rubin, Edward M Boffelli, Dario Primate-specific evolution of an LDLR enhancer |
title | Primate-specific evolution of an LDLR enhancer |
title_full | Primate-specific evolution of an LDLR enhancer |
title_fullStr | Primate-specific evolution of an LDLR enhancer |
title_full_unstemmed | Primate-specific evolution of an LDLR enhancer |
title_short | Primate-specific evolution of an LDLR enhancer |
title_sort | primate-specific evolution of an ldlr enhancer |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1779597/ https://www.ncbi.nlm.nih.gov/pubmed/16884525 http://dx.doi.org/10.1186/gb-2006-7-8-r68 |
work_keys_str_mv | AT wangqianfei primatespecificevolutionofanldlrenhancer AT prabhakarshyam primatespecificevolutionofanldlrenhancer AT wangqianben primatespecificevolutionofanldlrenhancer AT mosesalanm primatespecificevolutionofanldlrenhancer AT chanansumita primatespecificevolutionofanldlrenhancer AT brownmyles primatespecificevolutionofanldlrenhancer AT eisenmichaelb primatespecificevolutionofanldlrenhancer AT chengjanfang primatespecificevolutionofanldlrenhancer AT rubinedwardm primatespecificevolutionofanldlrenhancer AT boffellidario primatespecificevolutionofanldlrenhancer |