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Quantifying Organismal Complexity using a Population Genetic Approach
BACKGROUND: Various definitions of biological complexity have been proposed: the number of genes, cell types, or metabolic processes within an organism. As knowledge of biological systems has increased, it has become apparent that these metrics are often incongruent. METHODOLOGY: Here we propose an...
Autores principales: | , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2007
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1790863/ https://www.ncbi.nlm.nih.gov/pubmed/17299597 http://dx.doi.org/10.1371/journal.pone.0000217 |
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author | Tenaillon, Olivier Silander, Olin K. Uzan, Jean-Philippe Chao, Lin |
author_facet | Tenaillon, Olivier Silander, Olin K. Uzan, Jean-Philippe Chao, Lin |
author_sort | Tenaillon, Olivier |
collection | PubMed |
description | BACKGROUND: Various definitions of biological complexity have been proposed: the number of genes, cell types, or metabolic processes within an organism. As knowledge of biological systems has increased, it has become apparent that these metrics are often incongruent. METHODOLOGY: Here we propose an alternative complexity metric based on the number of genetically uncorrelated phenotypic traits contributing to an organism's fitness. This metric, phenotypic complexity, is more objective than previous suggestions, as complexity is measured from a fundamental biological perspective, that of natural selection. We utilize a model linking the equilibrium fitness (drift load) of a population to phenotypic complexity. We then use results from viral evolution experiments to compare the phenotypic complexities of two viruses, the bacteriophage X174 and vesicular stomatitis virus, and to illustrate the consistency of our approach and its applicability. CONCLUSIONS/SIGNIFICANCE: Because Darwinian evolution through natural selection is the fundamental element unifying all biological organisms, we propose that our metric of complexity is potentially a more relevant metric than others, based on the count of artificially defined set of objects. |
format | Text |
id | pubmed-1790863 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2007 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-17908632007-02-14 Quantifying Organismal Complexity using a Population Genetic Approach Tenaillon, Olivier Silander, Olin K. Uzan, Jean-Philippe Chao, Lin PLoS One Research Article BACKGROUND: Various definitions of biological complexity have been proposed: the number of genes, cell types, or metabolic processes within an organism. As knowledge of biological systems has increased, it has become apparent that these metrics are often incongruent. METHODOLOGY: Here we propose an alternative complexity metric based on the number of genetically uncorrelated phenotypic traits contributing to an organism's fitness. This metric, phenotypic complexity, is more objective than previous suggestions, as complexity is measured from a fundamental biological perspective, that of natural selection. We utilize a model linking the equilibrium fitness (drift load) of a population to phenotypic complexity. We then use results from viral evolution experiments to compare the phenotypic complexities of two viruses, the bacteriophage X174 and vesicular stomatitis virus, and to illustrate the consistency of our approach and its applicability. CONCLUSIONS/SIGNIFICANCE: Because Darwinian evolution through natural selection is the fundamental element unifying all biological organisms, we propose that our metric of complexity is potentially a more relevant metric than others, based on the count of artificially defined set of objects. Public Library of Science 2007-02-14 /pmc/articles/PMC1790863/ /pubmed/17299597 http://dx.doi.org/10.1371/journal.pone.0000217 Text en Tenaillon et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Tenaillon, Olivier Silander, Olin K. Uzan, Jean-Philippe Chao, Lin Quantifying Organismal Complexity using a Population Genetic Approach |
title | Quantifying Organismal Complexity using a Population Genetic Approach |
title_full | Quantifying Organismal Complexity using a Population Genetic Approach |
title_fullStr | Quantifying Organismal Complexity using a Population Genetic Approach |
title_full_unstemmed | Quantifying Organismal Complexity using a Population Genetic Approach |
title_short | Quantifying Organismal Complexity using a Population Genetic Approach |
title_sort | quantifying organismal complexity using a population genetic approach |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1790863/ https://www.ncbi.nlm.nih.gov/pubmed/17299597 http://dx.doi.org/10.1371/journal.pone.0000217 |
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