Cargando…

Quantifying Organismal Complexity using a Population Genetic Approach

BACKGROUND: Various definitions of biological complexity have been proposed: the number of genes, cell types, or metabolic processes within an organism. As knowledge of biological systems has increased, it has become apparent that these metrics are often incongruent. METHODOLOGY: Here we propose an...

Descripción completa

Detalles Bibliográficos
Autores principales: Tenaillon, Olivier, Silander, Olin K., Uzan, Jean-Philippe, Chao, Lin
Formato: Texto
Lenguaje:English
Publicado: Public Library of Science 2007
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1790863/
https://www.ncbi.nlm.nih.gov/pubmed/17299597
http://dx.doi.org/10.1371/journal.pone.0000217
_version_ 1782132130378153984
author Tenaillon, Olivier
Silander, Olin K.
Uzan, Jean-Philippe
Chao, Lin
author_facet Tenaillon, Olivier
Silander, Olin K.
Uzan, Jean-Philippe
Chao, Lin
author_sort Tenaillon, Olivier
collection PubMed
description BACKGROUND: Various definitions of biological complexity have been proposed: the number of genes, cell types, or metabolic processes within an organism. As knowledge of biological systems has increased, it has become apparent that these metrics are often incongruent. METHODOLOGY: Here we propose an alternative complexity metric based on the number of genetically uncorrelated phenotypic traits contributing to an organism's fitness. This metric, phenotypic complexity, is more objective than previous suggestions, as complexity is measured from a fundamental biological perspective, that of natural selection. We utilize a model linking the equilibrium fitness (drift load) of a population to phenotypic complexity. We then use results from viral evolution experiments to compare the phenotypic complexities of two viruses, the bacteriophage X174 and vesicular stomatitis virus, and to illustrate the consistency of our approach and its applicability. CONCLUSIONS/SIGNIFICANCE: Because Darwinian evolution through natural selection is the fundamental element unifying all biological organisms, we propose that our metric of complexity is potentially a more relevant metric than others, based on the count of artificially defined set of objects.
format Text
id pubmed-1790863
institution National Center for Biotechnology Information
language English
publishDate 2007
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-17908632007-02-14 Quantifying Organismal Complexity using a Population Genetic Approach Tenaillon, Olivier Silander, Olin K. Uzan, Jean-Philippe Chao, Lin PLoS One Research Article BACKGROUND: Various definitions of biological complexity have been proposed: the number of genes, cell types, or metabolic processes within an organism. As knowledge of biological systems has increased, it has become apparent that these metrics are often incongruent. METHODOLOGY: Here we propose an alternative complexity metric based on the number of genetically uncorrelated phenotypic traits contributing to an organism's fitness. This metric, phenotypic complexity, is more objective than previous suggestions, as complexity is measured from a fundamental biological perspective, that of natural selection. We utilize a model linking the equilibrium fitness (drift load) of a population to phenotypic complexity. We then use results from viral evolution experiments to compare the phenotypic complexities of two viruses, the bacteriophage X174 and vesicular stomatitis virus, and to illustrate the consistency of our approach and its applicability. CONCLUSIONS/SIGNIFICANCE: Because Darwinian evolution through natural selection is the fundamental element unifying all biological organisms, we propose that our metric of complexity is potentially a more relevant metric than others, based on the count of artificially defined set of objects. Public Library of Science 2007-02-14 /pmc/articles/PMC1790863/ /pubmed/17299597 http://dx.doi.org/10.1371/journal.pone.0000217 Text en Tenaillon et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Tenaillon, Olivier
Silander, Olin K.
Uzan, Jean-Philippe
Chao, Lin
Quantifying Organismal Complexity using a Population Genetic Approach
title Quantifying Organismal Complexity using a Population Genetic Approach
title_full Quantifying Organismal Complexity using a Population Genetic Approach
title_fullStr Quantifying Organismal Complexity using a Population Genetic Approach
title_full_unstemmed Quantifying Organismal Complexity using a Population Genetic Approach
title_short Quantifying Organismal Complexity using a Population Genetic Approach
title_sort quantifying organismal complexity using a population genetic approach
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1790863/
https://www.ncbi.nlm.nih.gov/pubmed/17299597
http://dx.doi.org/10.1371/journal.pone.0000217
work_keys_str_mv AT tenaillonolivier quantifyingorganismalcomplexityusingapopulationgeneticapproach
AT silanderolink quantifyingorganismalcomplexityusingapopulationgeneticapproach
AT uzanjeanphilippe quantifyingorganismalcomplexityusingapopulationgeneticapproach
AT chaolin quantifyingorganismalcomplexityusingapopulationgeneticapproach