xGDB: open-source computational infrastructure for the integrated evaluation and analysis of genome features

The eXtensible Genome Data Broker (xGDB) provides a software infrastructure consisting of integrated tools for the storage, display, and analysis of genome features in their genomic context. Common features include gene structure annotations, spliced alignments, mapping of repetitive sequence, and m...

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Detalles Bibliográficos
Autores principales: Schlueter, Shannon D, Wilkerson, Matthew D, Dong, Qunfeng, Brendel, Volker
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2006
Materias:
Software
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1794590/
https://www.ncbi.nlm.nih.gov/pubmed/17116260
http://dx.doi.org/10.1186/gb-2006-7-11-r111
Descripción
Sumario:The eXtensible Genome Data Broker (xGDB) provides a software infrastructure consisting of integrated tools for the storage, display, and analysis of genome features in their genomic context. Common features include gene structure annotations, spliced alignments, mapping of repetitive sequence, and microarray probes, but the software supports inclusion of any property that can be associated with a genomic location. The xGDB distribution and user support utilities are available online at the xGDB project website, http://xgdb.sourceforge.net/.

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