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Dry-reagent disposable dipstick test for visual screening of seven leukemia-related chromosomal translocations
We report the first dry-reagent, disposable, dipstick test for molecular screening of seven chromosomal translocations associated with acute and chronic leukemia. The dipstick assay offers about 10 times higher detectability than agarose gel electrophoresis and, contrary to electrophoresis, allows c...
Autores principales: | , , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2007
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1851627/ https://www.ncbi.nlm.nih.gov/pubmed/17251199 http://dx.doi.org/10.1093/nar/gkl1097 |
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author | Kalogianni, Despina P. Bravou, Vasiliki Christopoulos, Theodore K. Ioannou, Penelope C. Zoumbos, Nicholas C. |
author_facet | Kalogianni, Despina P. Bravou, Vasiliki Christopoulos, Theodore K. Ioannou, Penelope C. Zoumbos, Nicholas C. |
author_sort | Kalogianni, Despina P. |
collection | PubMed |
description | We report the first dry-reagent, disposable, dipstick test for molecular screening of seven chromosomal translocations associated with acute and chronic leukemia. The dipstick assay offers about 10 times higher detectability than agarose gel electrophoresis and, contrary to electrophoresis, allows confirmation of the sequence of the polymerase chain reaction (PCR) product by hybridization within a few minutes without the need of instrumentation. Biotinylated amplified DNA is hybridized with a dA-tailed probe and applied to the strip, which contains oligo(dT)-conjugated gold nanoparticles in dry form. Upon immersion of the strip in the appropriate buffer, the solution migrates and the hybrids are captured by immobilized streptavidin at the test zone generating a characteristic red line. The excess nanoparticles are captured by oligo(dA) strands immobilized at the control zone of the strip producing a second red line. We studied the: t(9;22)(q34;q11), t(15;17)(q22;q21), t(11;17)(q23;q21), t(5;17)(q32;q21), t(11;17)(q13;q21), t(8,21)(q22;q22) and inv(16)(p13;q22) that generate the BCR-ABL, PML-RARa, PLZF-RARa, NPM-RARa, NuMA-RARa, AML1-ETO and CBFβ-MYH11 fusion genes, respectively. A single K562 cell was detectable amidst 10(6) normal leukocytes. A dipstick test was developed for actin, as a reference gene. The dipstick assay with appropriate probes can be used for identification of the fusion transcripts involved in the translocation. |
format | Text |
id | pubmed-1851627 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2007 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-18516272007-04-26 Dry-reagent disposable dipstick test for visual screening of seven leukemia-related chromosomal translocations Kalogianni, Despina P. Bravou, Vasiliki Christopoulos, Theodore K. Ioannou, Penelope C. Zoumbos, Nicholas C. Nucleic Acids Res Methods Online We report the first dry-reagent, disposable, dipstick test for molecular screening of seven chromosomal translocations associated with acute and chronic leukemia. The dipstick assay offers about 10 times higher detectability than agarose gel electrophoresis and, contrary to electrophoresis, allows confirmation of the sequence of the polymerase chain reaction (PCR) product by hybridization within a few minutes without the need of instrumentation. Biotinylated amplified DNA is hybridized with a dA-tailed probe and applied to the strip, which contains oligo(dT)-conjugated gold nanoparticles in dry form. Upon immersion of the strip in the appropriate buffer, the solution migrates and the hybrids are captured by immobilized streptavidin at the test zone generating a characteristic red line. The excess nanoparticles are captured by oligo(dA) strands immobilized at the control zone of the strip producing a second red line. We studied the: t(9;22)(q34;q11), t(15;17)(q22;q21), t(11;17)(q23;q21), t(5;17)(q32;q21), t(11;17)(q13;q21), t(8,21)(q22;q22) and inv(16)(p13;q22) that generate the BCR-ABL, PML-RARa, PLZF-RARa, NPM-RARa, NuMA-RARa, AML1-ETO and CBFβ-MYH11 fusion genes, respectively. A single K562 cell was detectable amidst 10(6) normal leukocytes. A dipstick test was developed for actin, as a reference gene. The dipstick assay with appropriate probes can be used for identification of the fusion transcripts involved in the translocation. Oxford University Press 2007-02 2007-01-23 /pmc/articles/PMC1851627/ /pubmed/17251199 http://dx.doi.org/10.1093/nar/gkl1097 Text en © 2007 The Author(s). This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Methods Online Kalogianni, Despina P. Bravou, Vasiliki Christopoulos, Theodore K. Ioannou, Penelope C. Zoumbos, Nicholas C. Dry-reagent disposable dipstick test for visual screening of seven leukemia-related chromosomal translocations |
title | Dry-reagent disposable dipstick test for visual screening of seven leukemia-related chromosomal translocations |
title_full | Dry-reagent disposable dipstick test for visual screening of seven leukemia-related chromosomal translocations |
title_fullStr | Dry-reagent disposable dipstick test for visual screening of seven leukemia-related chromosomal translocations |
title_full_unstemmed | Dry-reagent disposable dipstick test for visual screening of seven leukemia-related chromosomal translocations |
title_short | Dry-reagent disposable dipstick test for visual screening of seven leukemia-related chromosomal translocations |
title_sort | dry-reagent disposable dipstick test for visual screening of seven leukemia-related chromosomal translocations |
topic | Methods Online |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1851627/ https://www.ncbi.nlm.nih.gov/pubmed/17251199 http://dx.doi.org/10.1093/nar/gkl1097 |
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