Systematic overestimation of gene gain through false diagnosis of gene absence

The usual BLAST-based methods for assessing gene presence and absence lead to systematic overestimation of within-species gene gain by lateral transfer.

Detalles Bibliográficos
Autores principales: Zhaxybayeva, Olga, Nesbø, Camilla L, Doolittle, W Ford
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2007
Materias:
Correspondence
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1852405/
https://www.ncbi.nlm.nih.gov/pubmed/17328791
http://dx.doi.org/10.1186/gb-2007-8-2-402
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author Zhaxybayeva, Olga
Nesbø, Camilla L
Doolittle, W Ford
author_facet Zhaxybayeva, Olga
Nesbø, Camilla L
Doolittle, W Ford
author_sort Zhaxybayeva, Olga
collection PubMed
description The usual BLAST-based methods for assessing gene presence and absence lead to systematic overestimation of within-species gene gain by lateral transfer.
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spelling pubmed-18524052007-04-18 Systematic overestimation of gene gain through false diagnosis of gene absence Zhaxybayeva, Olga Nesbø, Camilla L Doolittle, W Ford Genome Biol Correspondence The usual BLAST-based methods for assessing gene presence and absence lead to systematic overestimation of within-species gene gain by lateral transfer. BioMed Central 2007 2007-02-26 /pmc/articles/PMC1852405/ /pubmed/17328791 http://dx.doi.org/10.1186/gb-2007-8-2-402 Text en Copyright © 2007 BioMed Central Ltd
spellingShingle Correspondence
Zhaxybayeva, Olga
Nesbø, Camilla L
Doolittle, W Ford
Systematic overestimation of gene gain through false diagnosis of gene absence
title Systematic overestimation of gene gain through false diagnosis of gene absence
title_full Systematic overestimation of gene gain through false diagnosis of gene absence
title_fullStr Systematic overestimation of gene gain through false diagnosis of gene absence
title_full_unstemmed Systematic overestimation of gene gain through false diagnosis of gene absence
title_short Systematic overestimation of gene gain through false diagnosis of gene absence
title_sort systematic overestimation of gene gain through false diagnosis of gene absence
topic Correspondence
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1852405/
https://www.ncbi.nlm.nih.gov/pubmed/17328791
http://dx.doi.org/10.1186/gb-2007-8-2-402
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AT nesbøcamillal systematicoverestimationofgenegainthroughfalsediagnosisofgeneabsence
AT doolittlewford systematicoverestimationofgenegainthroughfalsediagnosisofgeneabsence

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