Cargando…

A comparison between microsatellite and single-nucleotide polymorphism markers with respect to two measures of information content

Using the Genetic Analysis Workshop 14 (GAW14) simulated dataset, we compare microsatellite and single-nucleotide polymorphism (SNP) markers in terms of two measures of information content, the traditional entropy-based information content measure, and a new "relative information" measure....

Descripción completa

Detalles Bibliográficos
Autores principales:	Thalamuthu, Anbupalam, Mukhopadhyay, Indranil, Ray, Amrita, Weeks, Daniel E
Formato:	Texto
Lenguaje:	English
Publicado:	BioMed Central 2005
Materias:	Proceedings
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1866759/ https://www.ncbi.nlm.nih.gov/pubmed/16451636 http://dx.doi.org/10.1186/1471-2156-6-S1-S27

Ejemplares similares

Association tests for rare and common variants based on genotypic and phenotypic measures of similarity between individuals
por: Thalamuthu, Anbupalam, et al.
Publicado: (2011)

Comparison of single-nucleotide polymorphisms and microsatellites in inference of population structure
por: Liu, Nianjun, et al.
Publicado: (2005)

Comparing single-nucleotide polymorphism marker-based and microsatellite marker-based linkage analyses
por: Ulgen, Ayse, et al.
Publicado: (2005)

Comparison of microsatellites, single-nucleotide polymorphisms (SNPs) and composite markers derived from SNPs in linkage analysis
por: Xing, Chao, et al.
Publicado: (2005)

Comparison of the power between microsatellite and single-nucleotide polymorphism markers for linkage and linkage disequilibrium mapping of an electrophysiological phenotype
por: Lin, Hsiu-Fen, et al.
Publicado: (2005)

Genome-wide linkage analysis for alcohol dependence: a comparison between single-nucleotide polymorphism and microsatellite marker assays
por: Ma, Qianli, et al.
Publicado: (2005)

Linkage analysis of the GAW14 simulated dataset with microsatellite and single-nucleotide polymorphism markers in large pedigrees
por: Yang, Xiaohong (Rose), et al.
Publicado: (2005)

Gene-based multiple trait analysis for exome sequencing data
por: Zhao, Jingyuan, et al.
Publicado: (2011)

Identity by descent and association analysis of dichotomous traits based on large pedigrees
por: Liu, Tian, et al.
Publicado: (2011)

Effect of genotyping error in model-free linkage analysis using microsatellite or single-nucleotide polymorphism marker maps
por: Thompson, Cheryl L, et al.
Publicado: (2005)

Whole-genome association analysis to identify markers associated with recombination rates using single-nucleotide polymorphisms and microsatellites
por: Huang, Song, et al.
Publicado: (2005)

Single-nucleotide polymorphism versus microsatellite markers in a combined linkage and segregation analysis of a quantitative trait
por: Daw, E Warwick, et al.
Publicado: (2005)

Linkage and association analyses of microsatellites and single-nucleotide polymorphisms in nuclear families
por: Lin, Jennifer, et al.
Publicado: (2005)

Comparison of single-nucleotide polymorphisms and microsatellites in detecting quantitative trait loci for alcoholism: The Collaborative Study on the Genetics of Alcoholism
por: Kim, Helen, et al.
Publicado: (2005)

Microsatellites versus single-nucleotide polymorphisms in linkage analysis for quantitative and qualitative measures
por: Dunn, Gerald, et al.
Publicado: (2005)

Genome-wide linkage analysis of age at onset of alcohol dependence: a comparison between microsatellites and single-nucleotide polymorphisms
por: Tayo, Bamidele O, et al.
Publicado: (2005)

Linkage analysis of complex diseases using microsatellites and single-nucleotide polymorphisms: application to alcoholism
por: Nsengimana, Jérémie, et al.
Publicado: (2005)

Genome scan linkage analysis comparing microsatellites and single-nucleotide polymorphisms markers for two measures of alcoholism in chromosomes 1, 4, and 7
por: Chen, Guanjie, et al.
Publicado: (2005)

Whole-genome linkage analysis in mapping alcoholism genes using single-nucleotide polymorphisms and microsatellites
por: Wang, Shuang, et al.
Publicado: (2005)

Microsatellite linkage analysis, single-nucleotide polymorphisms, and haplotype associations with ECB21 in the COGA data
por: Kraja, Aldi T, et al.
Publicado: (2005)

Linkage analysis of alcoholism-related electrophysiological phenotypes: genome scans with microsatellites compared to single-nucleotide polymorphisms
por: Bautista, Jocelyn F, et al.
Publicado: (2005)

Whole-genome association studies on alcoholism comparing different phenotypes using single-nucleotide polymorphisms and microsatellites
por: Chen, Liang, et al.
Publicado: (2005)

Comparison of tagging single-nucleotide polymorphism methods in association analyses
por: Goode, Ellen L, et al.
Publicado: (2007)

A genome-wide linkage analysis of alcoholism on microsatellite and single-nucleotide polymorphism data, using alcohol dependence phenotypes and electroencephalogram measures
por: Zhang, Chun, et al.
Publicado: (2005)

A comparison of five methods for selecting tagging single-nucleotide polymorphisms
por: Burkett, Kelly M, et al.
Publicado: (2005)

Performance comparison of two-point linkage methods using microsatellite markers flanking known disease locations
por: Logue, Mark W, et al.
Publicado: (2005)

Whole-genome variance components linkage analysis using single-nucleotide polymorphisms versus microsatellites on quantitative traits of derived phenotypes from factor analysis of electroencephalogram waves
por: Yu, Yi, et al.
Publicado: (2005)

Picking single-nucleotide polymorphisms in forests
por: Schwarz, Daniel F, et al.
Publicado: (2007)

Which strategy is better for linkage analysis: single-nucleotide polymorphisms or microsatellites? Evaluation by identity-by-state – identity-by-descent transformation affected sib-pair method on GAW14 data
por: Yue, Qingqi, et al.
Publicado: (2005)

Multipoint identity-by-descent computations for single-point polymorphism and microsatellite maps
por: Hinrichs, Anthony L, et al.
Publicado: (2005)

Marker selection for whole-genome association studies with two-stage designs using dense single-nucleotide polymorphisms
por: Li, Jing
Publicado: (2007)

Comparison of genome-wide single-nucleotide polymorphism linkage analyses in Caucasian and Hispanic NARAC families
por: Chen, Wei V, et al.
Publicado: (2007)

Joint analysis of sequence data and single-nucleotide polymorphism data using pedigree information for imputation and recombination inference
por: Song, Sunah, et al.
Publicado: (2014)

Selection of single-nucleotide polymorphisms in disease association data
por: Joo, Jungnam, et al.
Publicado: (2005)

A comparison in association and linkage genome-wide scans for alcoholism susceptibility genes using single-nucleotide polymorphisms
por: Chiu, Yen-Feng, et al.
Publicado: (2005)

Modeling the effect of an associated single-nucleotide polymorphism in linkage studies
por: Houwing-Duistermaat, Jeanine J, et al.
Publicado: (2005)

Evaluation of single-nucleotide polymorphism imputation using random forests
por: Schwarz, Daniel F, et al.
Publicado: (2009)

The efficacy of short tandem repeat polymorphisms versus single-nucleotide polymorphisms for resolving population structure
por: Kauwe, John SK, et al.
Publicado: (2005)

Analysis of high-density single-nucleotide polymorphism data: three novel methods that control for linkage disequilibrium between markers in a linkage analysis
por: Allen-Brady, Kristina, et al.
Publicado: (2007)

An analysis of identical single-nucleotide polymorphisms genotyped by two different platforms
por: Suarez, Brian K, et al.
Publicado: (2005)

Cannot write session to /tmp/vufind_sessions/sess_mgoa9cetikfkmbiu0uci7ov3b2