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A synthetic luxCDABE gene cluster optimized for expression in high-GC bacteria

The luxCDABE operon of the bioluminescent bacterium Photorhabdus luminescens has proven to be a superb transcriptional reporter. It encodes a luciferase (LuxA and LuxB) and the enzymes that produce its substrate (LuxC, LuxD and LuxE) so cells that express the cluster emit the 490-nm light spontaneou...

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Autores principales: Craney, Arryn, Hohenauer, Tobias, Xu, Ye, Navani, Naveen Kumar, Li, Yingfu, Nodwell, Justin
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2007
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1874620/
https://www.ncbi.nlm.nih.gov/pubmed/17337439
http://dx.doi.org/10.1093/nar/gkm086
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author Craney, Arryn
Hohenauer, Tobias
Xu, Ye
Navani, Naveen Kumar
Li, Yingfu
Nodwell, Justin
author_facet Craney, Arryn
Hohenauer, Tobias
Xu, Ye
Navani, Naveen Kumar
Li, Yingfu
Nodwell, Justin
author_sort Craney, Arryn
collection PubMed
description The luxCDABE operon of the bioluminescent bacterium Photorhabdus luminescens has proven to be a superb transcriptional reporter. It encodes a luciferase (LuxA and LuxB) and the enzymes that produce its substrate (LuxC, LuxD and LuxE) so cells that express the cluster emit the 490-nm light spontaneously. The sequence of these genes is AT-rich (>69%) and for this and other reasons, they are not expressed efficiently in high-GC bacteria like Streptomyces coelicolor. We therefore constructed a synthetic luxCDABE operon encoding the P. luminescens Lux proteins optimized for expression in high-GC bacteria. We tested the genes using transcriptional fusions to S. coelicolor promoters having well-established expression profiles during this organism's life cycle. The hrdB gene encodes a housekeeping sigma factor; while ramC is important for the formation of the spore-forming cells called aerial hyphae and whiE is required for the production of a grey, spore-associated pigment that is deposited in the walls of developing spores. Using these fusions we demonstrated that our synthetic lux genes are functional in S. coelicolor and that they accurately report complex developmental gene expression patterns. We suggest that this lux operon and our procedure for generating synthetic high-GC genes will be widely useful for research on high-GC bacteria.
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spelling pubmed-18746202007-05-23 A synthetic luxCDABE gene cluster optimized for expression in high-GC bacteria Craney, Arryn Hohenauer, Tobias Xu, Ye Navani, Naveen Kumar Li, Yingfu Nodwell, Justin Nucleic Acids Res Methods Online The luxCDABE operon of the bioluminescent bacterium Photorhabdus luminescens has proven to be a superb transcriptional reporter. It encodes a luciferase (LuxA and LuxB) and the enzymes that produce its substrate (LuxC, LuxD and LuxE) so cells that express the cluster emit the 490-nm light spontaneously. The sequence of these genes is AT-rich (>69%) and for this and other reasons, they are not expressed efficiently in high-GC bacteria like Streptomyces coelicolor. We therefore constructed a synthetic luxCDABE operon encoding the P. luminescens Lux proteins optimized for expression in high-GC bacteria. We tested the genes using transcriptional fusions to S. coelicolor promoters having well-established expression profiles during this organism's life cycle. The hrdB gene encodes a housekeeping sigma factor; while ramC is important for the formation of the spore-forming cells called aerial hyphae and whiE is required for the production of a grey, spore-associated pigment that is deposited in the walls of developing spores. Using these fusions we demonstrated that our synthetic lux genes are functional in S. coelicolor and that they accurately report complex developmental gene expression patterns. We suggest that this lux operon and our procedure for generating synthetic high-GC genes will be widely useful for research on high-GC bacteria. Oxford University Press 2007-03 2007-03-01 /pmc/articles/PMC1874620/ /pubmed/17337439 http://dx.doi.org/10.1093/nar/gkm086 Text en © 2007 The Author(s) This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Methods Online
Craney, Arryn
Hohenauer, Tobias
Xu, Ye
Navani, Naveen Kumar
Li, Yingfu
Nodwell, Justin
A synthetic luxCDABE gene cluster optimized for expression in high-GC bacteria
title A synthetic luxCDABE gene cluster optimized for expression in high-GC bacteria
title_full A synthetic luxCDABE gene cluster optimized for expression in high-GC bacteria
title_fullStr A synthetic luxCDABE gene cluster optimized for expression in high-GC bacteria
title_full_unstemmed A synthetic luxCDABE gene cluster optimized for expression in high-GC bacteria
title_short A synthetic luxCDABE gene cluster optimized for expression in high-GC bacteria
title_sort synthetic luxcdabe gene cluster optimized for expression in high-gc bacteria
topic Methods Online
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1874620/
https://www.ncbi.nlm.nih.gov/pubmed/17337439
http://dx.doi.org/10.1093/nar/gkm086
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