Cargando…
Comparison of approaches for rational siRNA design leading to a new efficient and transparent method
Current literature describes several methods for the design of efficient siRNAs with 19 perfectly matched base pairs and 2 nt overhangs. Using four independent databases totaling 3336 experimentally verified siRNAs, we compared how well several of these methods predict siRNA cleavage efficiency. Acc...
Autores principales: | Matveeva, Olga, Nechipurenko, Yury, Rossi, Leo, Moore, Barry, Sætrom, Pål, Ogurtsov, Aleksey Y., Atkins, John F., Shabalina, Svetlana A. |
---|---|
Formato: | Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2007
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1885645/ https://www.ncbi.nlm.nih.gov/pubmed/17426130 http://dx.doi.org/10.1093/nar/gkm088 |
Ejemplares similares
-
Optimization of Duplex Stability and Terminal Asymmetry for shRNA Design
por: Matveeva, Olga V., et al.
Publicado: (2010) -
Thermodynamic instability of siRNA duplex is a prerequisite for dependable prediction of siRNA activities
por: Ichihara, Masatoshi, et al.
Publicado: (2007) -
Aptamer mediated siRNA delivery
por: Chu, Ted C., et al.
Publicado: (2006) -
Uncertainty-aware and interpretable evaluation of Cas9–gRNA and Cas12a–gRNA specificity for fully matched and partially mismatched targets with Deep Kernel Learning
por: Kirillov, Bogdan, et al.
Publicado: (2021) -
Computational models with thermodynamic and composition features improve siRNA design
por: Shabalina, Svetlana A, et al.
Publicado: (2006)