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APDbase: Amino acid Physico­chemical properties Database

Physico-chemical properties of amino acids can be used to study protein sequence profiles, folding and function. We collated 242 properties for the 20 naturally occurring amino acids and created a dataset. The dataset is available as a database named APDbase( Amino acid Physico-chemical properties D...

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Detalles Bibliográficos
Autores principales: Mathura, Venkatarajan S, Kolippakkam, Deepak
Formato: Texto
Lenguaje:English
Publicado: Biomedical Informatics Publishing Group 2005
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1891621/
https://www.ncbi.nlm.nih.gov/pubmed/17597840
Descripción
Sumario:Physico-chemical properties of amino acids can be used to study protein sequence profiles, folding and function. We collated 242 properties for the 20 naturally occurring amino acids and created a dataset. The dataset is available as a database named APDbase( Amino acid Physico-chemical properties Data base). The database can be queried using either key words describing physico-chemical properties or pre-assigned database index number. The database contains corresponding references for each property value and facilitates deposition of new property values for processing and inclusion in the database. AVAILABILITY: The database is available for free at http://www.rfdn.org/bioinfo/APDbase.php