APDbase: Amino acid Physico­chemical properties Database

Physico-chemical properties of amino acids can be used to study protein sequence profiles, folding and function. We collated 242 properties for the 20 naturally occurring amino acids and created a dataset. The dataset is available as a database named APDbase( Amino acid Physico-chemical properties D...

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Detalles Bibliográficos
Autores principales: Mathura, Venkatarajan S, Kolippakkam, Deepak
Formato: Texto
Lenguaje:English
Publicado: Biomedical Informatics Publishing Group 2005
Materias:
Web Database
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1891621/
https://www.ncbi.nlm.nih.gov/pubmed/17597840
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author Mathura, Venkatarajan S
Kolippakkam, Deepak
author_facet Mathura, Venkatarajan S
Kolippakkam, Deepak
author_sort Mathura, Venkatarajan S
collection PubMed
description Physico-chemical properties of amino acids can be used to study protein sequence profiles, folding and function. We collated 242 properties for the 20 naturally occurring amino acids and created a dataset. The dataset is available as a database named APDbase( Amino acid Physico-chemical properties Data base). The database can be queried using either key words describing physico-chemical properties or pre-assigned database index number. The database contains corresponding references for each property value and facilitates deposition of new property values for processing and inclusion in the database. AVAILABILITY: The database is available for free at http://www.rfdn.org/bioinfo/APDbase.php
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spelling pubmed-18916212007-06-27 APDbase: Amino acid Physico­chemical properties Database Mathura, Venkatarajan S Kolippakkam, Deepak Bioinformation Web Database Physico-chemical properties of amino acids can be used to study protein sequence profiles, folding and function. We collated 242 properties for the 20 naturally occurring amino acids and created a dataset. The dataset is available as a database named APDbase( Amino acid Physico-chemical properties Data base). The database can be queried using either key words describing physico-chemical properties or pre-assigned database index number. The database contains corresponding references for each property value and facilitates deposition of new property values for processing and inclusion in the database. AVAILABILITY: The database is available for free at http://www.rfdn.org/bioinfo/APDbase.php Biomedical Informatics Publishing Group 2005-03-12 /pmc/articles/PMC1891621/ /pubmed/17597840 Text en © 2005 Biomedical Informatics Publishing Group This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited.
spellingShingle Web Database
Mathura, Venkatarajan S
Kolippakkam, Deepak
APDbase: Amino acid Physico­chemical properties Database
title APDbase: Amino acid Physico­chemical properties Database
title_full APDbase: Amino acid Physico­chemical properties Database
title_fullStr APDbase: Amino acid Physico­chemical properties Database
title_full_unstemmed APDbase: Amino acid Physico­chemical properties Database
title_short APDbase: Amino acid Physico­chemical properties Database
title_sort apdbase: amino acid physico­chemical properties database
topic Web Database
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1891621/
https://www.ncbi.nlm.nih.gov/pubmed/17597840
work_keys_str_mv AT mathuravenkatarajans apdbaseaminoacidphysicochemicalpropertiesdatabase
AT kolippakkamdeepak apdbaseaminoacidphysicochemicalpropertiesdatabase

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