Cargando…

Characterization of protein-interaction networks in tumors

BACKGROUND: Analyzing differential-gene-expression data in the context of protein-interaction networks (PINs) yields information on the functional cellular status. PINs can be formally represented as graphs, and approximating PINs as undirected graphs allows the network properties to be characterize...

Descripción completa

Detalles Bibliográficos
Autores principales:	Platzer, Alexander, Perco, Paul, Lukas, Arno, Mayer, Bernd
Formato:	Texto
Lenguaje:	English
Publicado:	BioMed Central 2007
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1929125/ https://www.ncbi.nlm.nih.gov/pubmed/17597514 http://dx.doi.org/10.1186/1471-2105-8-224

Ejemplares similares

Analysis and prediction of protective continuous B-cell epitopes on pathogen proteins
por: Sollner, Johannes, et al.
Publicado: (2008)

Vascular endothelial growth factor A as predictive marker for mTOR inhibition in relapsing high-grade serous ovarian cancer
por: Andorfer, Peter, et al.
Publicado: (2016)

From molecular signatures to predictive biomarkers: modeling disease pathophysiology and drug mechanism of action
por: Heinzel, Andreas, et al.
Publicado: (2014)

Integrative Bioinformatics Analysis of Proteins Associated with the Cardiorenal Syndrome
por: Mühlberger, Irmgard, et al.
Publicado: (2010)

Linking the ovarian cancer transcriptome and immunome
por: Rapberger, Ronald, et al.
Publicado: (2008)

Synthetic lethality guiding selection of drug combinations in ovarian cancer
por: Heinzel, Andreas, et al.
Publicado: (2019)

Interaction networks for identifying coupled molecular processes in microbial communities
por: Bosse, Magnus, et al.
Publicado: (2015)

Biomarker panels for characterizing microbial community biofilm formation as composite molecular process
por: Bosse, Magnus, et al.
Publicado: (2018)

A 3-biomarker-panel predicts renal outcome in patients with proteinuric renal diseases
por: Neuwirt, Hannes, et al.
Publicado: (2014)

Biocompatibility of peritoneal dialysis solutions determined by genomics of human leucocytes: a cross-over study
por: Wilflingseder, Julia, et al.
Publicado: (2009)

Protein Interactome of Muscle Invasive Bladder Cancer
por: Bhat, Akshay, et al.
Publicado: (2015)

Molecular Pathogenesis of Post-Transplant Acute Kidney Injury: Assessment of Whole-Genome mRNA and MiRNA Profiles
por: Wilflingseder, Julia, et al.
Publicado: (2014)

Positioning of Tacrolimus for the Treatment of Diabetic Nephropathy Based on Computational Network Analysis
por: Aschauer, Constantin, et al.
Publicado: (2017)

Prediction and characterization of protein-protein interaction networks in swine
por: Wang, Fen, et al.
Publicado: (2012)

Biomarker candidates for cardiovascular disease and bone metabolism disorders in chronic kidney disease: a systems biology perspective
por: Perco, Paul, et al.
Publicado: (2008)

Multimarker Panels in Diabetic Kidney Disease: The Way to Improved Clinical Trial Design and Clinical Practice?
por: Perco, Paul, et al.
Publicado: (2018)

Increased Renal Versican Expression Is Associated with Progression of Chronic Kidney Disease
por: Rudnicki, Michael, et al.
Publicado: (2012)

Coregulation Analysis of Mechanistic Biomarkers in Autosomal Dominant Polycystic Kidney Disease
por: Leierer, Johannes, et al.
Publicado: (2021)

A Meta-Analysis of Human Transcriptomics Data in the Context of Peritoneal Dialysis Identifies Novel Receptor-Ligand Interactions as Potential Therapeutic Targets
por: Evgeniou, Michail, et al.
Publicado: (2021)

Association of the COVID-19 pandemic with Internet Search Volumes: A Google Trends(TM) Analysis
por: Effenberger, Maria, et al.
Publicado: (2020)

Computational Drug Screening Identifies Compounds Targeting Renal Age-associated Molecular Profiles
por: Koppelstaetter, Christian, et al.
Publicado: (2019)

What properties characterize the hub proteins of the protein-protein interaction network of Saccharomyces cerevisiae?
por: Ekman, Diana, et al.
Publicado: (2006)

Predictive Biomarkers in Nephrology Around the Corner
por: Perco, Paul, et al.
Publicado: (2019)

Interspecies protein-protein interaction network construction for characterization of host-pathogen interactions: a Candida albicans-zebrafish interaction study
por: Wang, Yu-Chao, et al.
Publicado: (2013)

Synthetic lethal combinations of low-toxicity drugs for breast cancer identified in silico by genetic screens in yeast
por: Marhold, Maximilian, et al.
Publicado: (2018)

Prediction and characterization of protein-protein interaction network in Bacillus licheniformis WX-02
por: Han, Yi-Chao, et al.
Publicado: (2016)

Evaluation of the Zucker Diabetic Fatty (ZDF) Rat as a Model for Human Disease Based on Urinary Peptidomic Profiles
por: Siwy, Justyna, et al.
Publicado: (2012)

Assessment of Fibrinogen-like 2 (FGL2) in Human Chronic Kidney Disease through Transcriptomics Data Analysis
por: Denicolò, Sara, et al.
Publicado: (2022)

Characterizing alternative splicing effects on protein interaction networks with LINDA
por: Gjerga, Enio, et al.
Publicado: (2023)

PI by NMR: Probing CH–π Interactions in Protein–Ligand Complexes by NMR Spectroscopy
por: Platzer, Gerald, et al.
Publicado: (2020)

Functional characterization of two novel 5' untranslated exons reveals a complex regulation of NOD2 protein expression
por: Rosenstiel, Philip, et al.
Publicado: (2007)

Canagliflozin reduces inflammation and fibrosis biomarkers: a potential mechanism of action for beneficial effects of SGLT2 inhibitors in diabetic kidney disease
por: Heerspink, Hiddo J. L., et al.
Publicado: (2019)

Inferring Novel Tumor Suppressor Genes with a Protein-Protein Interaction Network and Network Diffusion Algorithms
por: Chen, Lei, et al.
Publicado: (2018)

An Interaction Network Predicted from Public Data as a Discovery Tool: Application to the Hsp90 Molecular Chaperone Machine
por: Echeverría, Pablo C., et al.
Publicado: (2011)

Characterization the regulation of herpesvirus miRNAs from the view of human protein interaction network
por: Li, Zhenpeng, et al.
Publicado: (2011)

In silico identification and biochemical characterization of the human dicarboxylate clamp TPR protein interaction network
por: Bernadotte, Alexandra, et al.
Publicado: (2018)

Validation of systems biology derived molecular markers of renal donor organ status associated with long term allograft function
por: Perco, Paul, et al.
Publicado: (2018)

Network-based characterization of drug-protein interaction signatures with a space-efficient approach
por: Tabei, Yasuo, et al.
Publicado: (2019)

NatalieQ: A web server for protein-protein interaction network querying
por: El-Kebir, Mohammed, et al.
Publicado: (2014)

Discovering functional interaction patterns in protein-protein interaction networks
por: Turanalp, Mehmet E, et al.
Publicado: (2008)

Cannot write session to /tmp/vufind_sessions/sess_9s8ll6kn7hv49h5a61bv5tsc2r