Cargando…

Analysis of 14 BAC sequences from the Aedes aegypti genome: a benchmark for genome annotation and assembly

BACKGROUND: Aedes aegypti is the principal vector of yellow fever and dengue viruses throughout the tropical world. To provide a set of manually curated and annotated sequences from the Ae. aegypti genome, 14 mapped bacterial artificial chromosome (BAC) clones encompassing 1.57 Mb were sequenced, as...

Descripción completa

Detalles Bibliográficos
Autores principales:	Lobo, Neil F, Campbell, Kathy S, Thaner, Daniel, deBruyn, Becky, Koo, Hean, Gelbart, William M, Loftus, Brendan J, Severson, David W, Collins, Frank H
Formato:	Texto
Lenguaje:	English
Publicado:	BioMed Central 2007
Materias:	Research
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1929151/ https://www.ncbi.nlm.nih.gov/pubmed/17519023 http://dx.doi.org/10.1186/gb-2007-8-5-r88

Ejemplares similares

An Integrated Linkage, Chromosome, and Genome Map for the Yellow Fever Mosquito Aedes aegypti
por: Timoshevskiy, Vladimir A., et al.
Publicado: (2013)

Stage-specific transcription during development of Aedes aegypti
por: Harker, Brent W, et al.
Publicado: (2013)

Genomic composition and evolution of Aedes aegypti chromosomes revealed by the analysis of physically mapped supercontigs
por: Timoshevskiy, Vladimir A, et al.
Publicado: (2014)

Genome-Based Microsatellite Development in the Culex pipiens Complex and Comparative Microsatellite Frequency with Aedes aegypti and Anopheles gambiae
por: Hickner, Paul V., et al.
Publicado: (2010)

Genome-based polymorphic microsatellite development and validation in the mosquito Aedes aegypti and application to population genetics in Haiti
por: Lovin, Diane D, et al.
Publicado: (2009)

Enhancing genome investigations in the mosquito Culex quinquefasciatus via BAC library construction and characterization
por: Hickner, Paul V, et al.
Publicado: (2011)

Global Cross-Talk of Genes of the Mosquito Aedes aegypti in Response to Dengue Virus Infection
por: Behura, Susanta K., et al.
Publicado: (2011)

Comparative Expression Profiles of Midgut Genes in Dengue Virus Refractory and Susceptible Aedes aegypti across Critical Period for Virus Infection
por: Chauhan, Chitra, et al.
Publicado: (2012)

Post-Integration Silencing of piggyBac Transposable Elements in Aedes aegypti
por: Palavesam, Azhahianambi, et al.
Publicado: (2013)

Genome Investigations of Vector Competence in Aedes aegypti to Inform Novel Arbovirus Disease Control Approaches
por: Severson, David W., et al.
Publicado: (2016)

Proteomics informed by transcriptomics for characterising active transposable elements and genome annotation in Aedes aegypti
por: Maringer, Kevin, et al.
Publicado: (2017)

Genome-Wide Transcriptome Profiling Reveals Genes Associated with Meiotic Drive System of Aedes aegypti
por: Shin, Dongyoung, et al.
Publicado: (2019)

Imaginal Discs – A New Source of Chromosomes for Genome Mapping of the Yellow Fever Mosquito Aedes aegypti
por: Sharakhova, Maria V., et al.
Publicado: (2011)

BacMap: an interactive picture atlas of annotated bacterial genomes
por: Stothard, Paul, et al.
Publicado: (2005)

Comprehensive DNA methylation analysis of the Aedes aegypti genome
por: Falckenhayn, Cassandra, et al.
Publicado: (2016)

BacMap: an up-to-date electronic atlas of annotated bacterial genomes
por: Cruz, Joseph, et al.
Publicado: (2012)

Recent History of Aedes aegypti: Vector Genomics and Epidemiology Records
por: Powell, Jeffrey R, et al.
Publicado: (2018)

The genomic signal of local environmental adaptation in Aedes aegypti mosquitoes
por: Bennett, Kelly L., et al.
Publicado: (2021)

Functional genetic characterization of salivary gland development in Aedes aegypti
por: Nguyen, Chilinh, et al.
Publicado: (2013)

An annotated catalogue of salivary gland transcripts in the adult female mosquito, Ædes ægypti*
por: Ribeiro, José MC, et al.
Publicado: (2007)

Population genomics of two invasive mosquitoes (Aedes aegypti and Aedes albopictus) from the Indo-Pacific
por: Schmidt, Thomas L., et al.
Publicado: (2020)

Genome-wide divergence among invasive populations of Aedes aegypti in California
por: Lee, Yoosook, et al.
Publicado: (2019)

Improved reference genome of Aedes aegypti informs arbovirus vector control
por: Matthews, Benjamin J., et al.
Publicado: (2018)

Microevolution of Aedes aegypti
por: Louise, Caroline, et al.
Publicado: (2015)

Etymologia: Aedes aegypti
Publicado: (2016)

Overlapping genes of Aedes aegypti: evolutionary implications from comparison with orthologs of Anopheles gambiae and other insects
por: Behura, Susanta K, et al.
Publicado: (2013)

Aedes aegypti and Aedes albopictus Ocurrences in Guatemala
por: Lepe-Lopez, Manuel, et al.
Publicado: (2017)

Semaphorin-1a Is Required for Aedes aegypti Embryonic Nerve Cord Development
por: Haugen, Morgan, et al.
Publicado: (2011)

High-throughput cis-regulatory element discovery in the vector mosquito Aedes aegypti
por: Behura, Susanta K., et al.
Publicado: (2016)

Genomic signatures of local adaptation in recent invasive Aedes aegypti populations in California
por: Soudi, Shaghayegh, et al.
Publicado: (2023)

The reemergence of Aedes aegypti in Arizona.
por: Engelthaler, D M, et al.
Publicado: (1997)

Aedes aegypti in Tucson, Arizona.
por: Fink, T M, et al.
Publicado: (1998)

The neurotranscriptome of the Aedes aegypti mosquito
por: Matthews, Benjamin J., et al.
Publicado: (2016)

Population genomics in the arboviral vector Aedes aegypti reveals the genomic architecture and evolution of endogenous viral elements
por: Crava, Cristina M., et al.
Publicado: (2021)

De Novo Assembly and Annotation of the Asian Tiger Mosquito (Aedes albopictus) Repeatome with dnaPipeTE from Raw Genomic Reads and Comparative Analysis with the Yellow Fever Mosquito (Aedes aegypti)
por: Goubert, Clément, et al.
Publicado: (2015)

Comparative genomics shows that viral integrations are abundant and express piRNAs in the arboviral vectors Aedes aegypti and Aedes albopictus
por: Palatini, Umberto, et al.
Publicado: (2017)

Investigations of Koutango Virus Infectivity and Dissemination Dynamics in Aedes aegypti Mosquitoes
por: de Araújo Lobo, Jaime M, et al.
Publicado: (2014)

Multifaceted functional implications of an endogenously expressed tRNA fragment in the vector mosquito Aedes aegypti
por: Eng, Matthew W., et al.
Publicado: (2018)

Benchmarking gene set of gymnosperms for assessing genome and annotation completeness in BUSCO
por: Wu, Jun-Jie, et al.
Publicado: (2023)

Comparative Genomics of Odorant Binding Proteins in Anopheles gambiae, Aedes aegypti, and Culex quinquefasciatus
por: Manoharan, Malini, et al.
Publicado: (2013)

Cannot write session to /tmp/vufind_sessions/sess_cqd44gnfcgr3rlalm4rg8oaeog