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DSHIFT: a web server for predicting DNA chemical shifts
DSHIFT is a web server for predicting chemical shifts of DNA sequences in random coil form or double helical B-form. The prediction methods are based on sets of published reference chemical shift values and correction factors which account for shielding or deshielding effects from neighboring nucleo...
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Formato: | Texto |
Lenguaje: | English |
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Oxford University Press
2007
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1933157/ https://www.ncbi.nlm.nih.gov/pubmed/17517771 http://dx.doi.org/10.1093/nar/gkm320 |
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author | Lam, Sik Lok |
author_facet | Lam, Sik Lok |
author_sort | Lam, Sik Lok |
collection | PubMed |
description | DSHIFT is a web server for predicting chemical shifts of DNA sequences in random coil form or double helical B-form. The prediction methods are based on sets of published reference chemical shift values and correction factors which account for shielding or deshielding effects from neighboring nucleotides. Proton, carbon and phosphorus chemical shift predictions are available for random coil DNAs. For double helical B-DNA, only proton chemical shift prediction is available. Results from these predictions will be useful for facilitating NMR resonance assignments and investigating structural features of solution DNA molecules. The URL of this server is: http://www.chem.cuhk.edu.hk/DSHIFT. |
format | Text |
id | pubmed-1933157 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2007 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-19331572007-07-31 DSHIFT: a web server for predicting DNA chemical shifts Lam, Sik Lok Nucleic Acids Res Articles DSHIFT is a web server for predicting chemical shifts of DNA sequences in random coil form or double helical B-form. The prediction methods are based on sets of published reference chemical shift values and correction factors which account for shielding or deshielding effects from neighboring nucleotides. Proton, carbon and phosphorus chemical shift predictions are available for random coil DNAs. For double helical B-DNA, only proton chemical shift prediction is available. Results from these predictions will be useful for facilitating NMR resonance assignments and investigating structural features of solution DNA molecules. The URL of this server is: http://www.chem.cuhk.edu.hk/DSHIFT. Oxford University Press 2007-07 2007-05-21 /pmc/articles/PMC1933157/ /pubmed/17517771 http://dx.doi.org/10.1093/nar/gkm320 Text en © 2007 The Author(s) http://creativecommons.org/licenses/by-nc/2.0/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Articles Lam, Sik Lok DSHIFT: a web server for predicting DNA chemical shifts |
title | DSHIFT: a web server for predicting DNA chemical shifts |
title_full | DSHIFT: a web server for predicting DNA chemical shifts |
title_fullStr | DSHIFT: a web server for predicting DNA chemical shifts |
title_full_unstemmed | DSHIFT: a web server for predicting DNA chemical shifts |
title_short | DSHIFT: a web server for predicting DNA chemical shifts |
title_sort | dshift: a web server for predicting dna chemical shifts |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1933157/ https://www.ncbi.nlm.nih.gov/pubmed/17517771 http://dx.doi.org/10.1093/nar/gkm320 |
work_keys_str_mv | AT lamsiklok dshiftawebserverforpredictingdnachemicalshifts |