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DSHIFT: a web server for predicting DNA chemical shifts

DSHIFT is a web server for predicting chemical shifts of DNA sequences in random coil form or double helical B-form. The prediction methods are based on sets of published reference chemical shift values and correction factors which account for shielding or deshielding effects from neighboring nucleo...

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Detalles Bibliográficos
Autor principal: Lam, Sik Lok
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2007
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1933157/
https://www.ncbi.nlm.nih.gov/pubmed/17517771
http://dx.doi.org/10.1093/nar/gkm320
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author Lam, Sik Lok
author_facet Lam, Sik Lok
author_sort Lam, Sik Lok
collection PubMed
description DSHIFT is a web server for predicting chemical shifts of DNA sequences in random coil form or double helical B-form. The prediction methods are based on sets of published reference chemical shift values and correction factors which account for shielding or deshielding effects from neighboring nucleotides. Proton, carbon and phosphorus chemical shift predictions are available for random coil DNAs. For double helical B-DNA, only proton chemical shift prediction is available. Results from these predictions will be useful for facilitating NMR resonance assignments and investigating structural features of solution DNA molecules. The URL of this server is: http://www.chem.cuhk.edu.hk/DSHIFT.
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spelling pubmed-19331572007-07-31 DSHIFT: a web server for predicting DNA chemical shifts Lam, Sik Lok Nucleic Acids Res Articles DSHIFT is a web server for predicting chemical shifts of DNA sequences in random coil form or double helical B-form. The prediction methods are based on sets of published reference chemical shift values and correction factors which account for shielding or deshielding effects from neighboring nucleotides. Proton, carbon and phosphorus chemical shift predictions are available for random coil DNAs. For double helical B-DNA, only proton chemical shift prediction is available. Results from these predictions will be useful for facilitating NMR resonance assignments and investigating structural features of solution DNA molecules. The URL of this server is: http://www.chem.cuhk.edu.hk/DSHIFT. Oxford University Press 2007-07 2007-05-21 /pmc/articles/PMC1933157/ /pubmed/17517771 http://dx.doi.org/10.1093/nar/gkm320 Text en © 2007 The Author(s) http://creativecommons.org/licenses/by-nc/2.0/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Lam, Sik Lok
DSHIFT: a web server for predicting DNA chemical shifts
title DSHIFT: a web server for predicting DNA chemical shifts
title_full DSHIFT: a web server for predicting DNA chemical shifts
title_fullStr DSHIFT: a web server for predicting DNA chemical shifts
title_full_unstemmed DSHIFT: a web server for predicting DNA chemical shifts
title_short DSHIFT: a web server for predicting DNA chemical shifts
title_sort dshift: a web server for predicting dna chemical shifts
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1933157/
https://www.ncbi.nlm.nih.gov/pubmed/17517771
http://dx.doi.org/10.1093/nar/gkm320
work_keys_str_mv AT lamsiklok dshiftawebserverforpredictingdnachemicalshifts