MyHits: improvements to an interactive resource for analyzing protein sequences

The MyHits web site (http://myhits.isb-sib.ch) is an integrated service dedicated to the analysis of protein sequences. Since its first description in 2004, both the user interface and the back end of the server were improved. A number of tools (e.g. MAFFT, Jacop, Dotlet, Jalview, ESTScan) were adde...

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Detalles Bibliográficos
Autores principales: Pagni, Marco, Ioannidis, Vassilios, Cerutti, Lorenzo, Zahn-Zabal, Monique, Jongeneel, C. Victor, Hau, Jörg, Martin, Olivier, Kuznetsov, Dmitri, Falquet, Laurent
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2007
Materias:
Articles
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1933190/
https://www.ncbi.nlm.nih.gov/pubmed/17545200
http://dx.doi.org/10.1093/nar/gkm352
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author Pagni, Marco
Ioannidis, Vassilios
Cerutti, Lorenzo
Zahn-Zabal, Monique
Jongeneel, C. Victor
Hau, Jörg
Martin, Olivier
Kuznetsov, Dmitri
Falquet, Laurent
author_facet Pagni, Marco
Ioannidis, Vassilios
Cerutti, Lorenzo
Zahn-Zabal, Monique
Jongeneel, C. Victor
Hau, Jörg
Martin, Olivier
Kuznetsov, Dmitri
Falquet, Laurent
author_sort Pagni, Marco
collection PubMed
description The MyHits web site (http://myhits.isb-sib.ch) is an integrated service dedicated to the analysis of protein sequences. Since its first description in 2004, both the user interface and the back end of the server were improved. A number of tools (e.g. MAFFT, Jacop, Dotlet, Jalview, ESTScan) were added or updated to improve the usability of the service. The MySQL schema and its associated API were revamped and the database engine (HitKeeper) was separated from the web interface. This paper summarizes the current status of the server, with an emphasis on the new services.
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spelling pubmed-19331902007-07-31 MyHits: improvements to an interactive resource for analyzing protein sequences Pagni, Marco Ioannidis, Vassilios Cerutti, Lorenzo Zahn-Zabal, Monique Jongeneel, C. Victor Hau, Jörg Martin, Olivier Kuznetsov, Dmitri Falquet, Laurent Nucleic Acids Res Articles The MyHits web site (http://myhits.isb-sib.ch) is an integrated service dedicated to the analysis of protein sequences. Since its first description in 2004, both the user interface and the back end of the server were improved. A number of tools (e.g. MAFFT, Jacop, Dotlet, Jalview, ESTScan) were added or updated to improve the usability of the service. The MySQL schema and its associated API were revamped and the database engine (HitKeeper) was separated from the web interface. This paper summarizes the current status of the server, with an emphasis on the new services. Oxford University Press 2007-07 2007-06-01 /pmc/articles/PMC1933190/ /pubmed/17545200 http://dx.doi.org/10.1093/nar/gkm352 Text en © 2007 The Author(s) http://creativecommons.org/licenses/by-nc/2.0/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Pagni, Marco
Ioannidis, Vassilios
Cerutti, Lorenzo
Zahn-Zabal, Monique
Jongeneel, C. Victor
Hau, Jörg
Martin, Olivier
Kuznetsov, Dmitri
Falquet, Laurent
MyHits: improvements to an interactive resource for analyzing protein sequences
title MyHits: improvements to an interactive resource for analyzing protein sequences
title_full MyHits: improvements to an interactive resource for analyzing protein sequences
title_fullStr MyHits: improvements to an interactive resource for analyzing protein sequences
title_full_unstemmed MyHits: improvements to an interactive resource for analyzing protein sequences
title_short MyHits: improvements to an interactive resource for analyzing protein sequences
title_sort myhits: improvements to an interactive resource for analyzing protein sequences
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1933190/
https://www.ncbi.nlm.nih.gov/pubmed/17545200
http://dx.doi.org/10.1093/nar/gkm352
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