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FGF: A web tool for Fishing Gene Family in a whole genome database

Gene duplication is an important process in evolution. The availability of genome sequences of a number of organisms has made it possible to conduct comprehensive searches for duplicated genes enabling informative studies of their evolution. We have established the FGF (Fishing Gene Family) program...

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Detalles Bibliográficos
Autores principales: Zheng, Hongkun, Shi, Junjie, Fang, Xiaodong, Li, Yuan, Vang, Søren, Fan, Wei, Wang, Junyi, Zhang, Zhang, Wang, Wen, Kristiansen, Karsten, Wang, Jun
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2007
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1933194/
https://www.ncbi.nlm.nih.gov/pubmed/17584790
http://dx.doi.org/10.1093/nar/gkm426
Descripción
Sumario:Gene duplication is an important process in evolution. The availability of genome sequences of a number of organisms has made it possible to conduct comprehensive searches for duplicated genes enabling informative studies of their evolution. We have established the FGF (Fishing Gene Family) program to efficiently search for and identify gene families. The FGF output displays the results as visual phylogenetic trees including information on gene structure, chromosome position, duplication fate and selective pressure. It is particularly useful to identify pseudogenes and detect changes in gene structure. FGF is freely available on a web server at http://fgf.genomics.org.cn/