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The Anopheles gambiae glutathione transferase supergene family: annotation, phylogeny and expression profiles

BACKGROUND: Twenty-eight genes putatively encoding cytosolic glutathione transferases have been identified in the Anopheles gambiae genome. We manually annotated these genes and then confirmed the annotation by sequencing of A. gambiae cDNAs. Phylogenetic analysis with the 37 putative GST genes from...

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Autores principales: Ding, Yunchuan, Ortelli, Federica, Rossiter, Louise C, Hemingway, Janet, Ranson, Hilary
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2003
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC194574/
https://www.ncbi.nlm.nih.gov/pubmed/12914673
http://dx.doi.org/10.1186/1471-2164-4-35
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author Ding, Yunchuan
Ortelli, Federica
Rossiter, Louise C
Hemingway, Janet
Ranson, Hilary
author_facet Ding, Yunchuan
Ortelli, Federica
Rossiter, Louise C
Hemingway, Janet
Ranson, Hilary
author_sort Ding, Yunchuan
collection PubMed
description BACKGROUND: Twenty-eight genes putatively encoding cytosolic glutathione transferases have been identified in the Anopheles gambiae genome. We manually annotated these genes and then confirmed the annotation by sequencing of A. gambiae cDNAs. Phylogenetic analysis with the 37 putative GST genes from Drosophila and representative GSTs from other taxa was undertaken to develop a nomenclature for insect GSTs. The epsilon class of insect GSTs has previously been implicated in conferring insecticide resistance in several insect species. We compared the expression level of all members of this GST class in two strains of A. gambiae to determine whether epsilon GST expression is correlated with insecticide resistance status. RESULTS: Two A. gambiae GSTs are alternatively spliced resulting in a maximum number of 32 transcripts encoding cytosolic GSTs. We detected cDNAs for 31 of these in adult mosquitoes. There are at least six different classes of GSTs in insects but 20 of the A. gambiae GSTs belong to the two insect specific classes, delta and epsilon. Members of these two GST classes are clustered on chromosome arms 2L and 3R respectively. Two members of the GST supergene family are intronless. Amongst the remainder, there are 13 unique introns positions but within the epsilon and delta class, there is considerable conservation of intron positions. Five of the eight epsilon GSTs are overexpressed in a DDT resistant strain of A. gambiae. CONCLUSIONS: The GST supergene family in A. gambiae is extensive and regulation of transcription of these genes is complex. Expression profiling of the epsilon class supports earlier predictions that this class is important in conferring insecticide resistance.
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spelling pubmed-1945742003-09-16 The Anopheles gambiae glutathione transferase supergene family: annotation, phylogeny and expression profiles Ding, Yunchuan Ortelli, Federica Rossiter, Louise C Hemingway, Janet Ranson, Hilary BMC Genomics Research Article BACKGROUND: Twenty-eight genes putatively encoding cytosolic glutathione transferases have been identified in the Anopheles gambiae genome. We manually annotated these genes and then confirmed the annotation by sequencing of A. gambiae cDNAs. Phylogenetic analysis with the 37 putative GST genes from Drosophila and representative GSTs from other taxa was undertaken to develop a nomenclature for insect GSTs. The epsilon class of insect GSTs has previously been implicated in conferring insecticide resistance in several insect species. We compared the expression level of all members of this GST class in two strains of A. gambiae to determine whether epsilon GST expression is correlated with insecticide resistance status. RESULTS: Two A. gambiae GSTs are alternatively spliced resulting in a maximum number of 32 transcripts encoding cytosolic GSTs. We detected cDNAs for 31 of these in adult mosquitoes. There are at least six different classes of GSTs in insects but 20 of the A. gambiae GSTs belong to the two insect specific classes, delta and epsilon. Members of these two GST classes are clustered on chromosome arms 2L and 3R respectively. Two members of the GST supergene family are intronless. Amongst the remainder, there are 13 unique introns positions but within the epsilon and delta class, there is considerable conservation of intron positions. Five of the eight epsilon GSTs are overexpressed in a DDT resistant strain of A. gambiae. CONCLUSIONS: The GST supergene family in A. gambiae is extensive and regulation of transcription of these genes is complex. Expression profiling of the epsilon class supports earlier predictions that this class is important in conferring insecticide resistance. BioMed Central 2003-08-13 /pmc/articles/PMC194574/ /pubmed/12914673 http://dx.doi.org/10.1186/1471-2164-4-35 Text en Copyright © 2003 Ding et al; licensee BioMed Central Ltd. This is an Open Access article: verbatim copying and redistribution of this article are permitted in all media for any purpose, provided this notice is preserved along with the article's original URL.
spellingShingle Research Article
Ding, Yunchuan
Ortelli, Federica
Rossiter, Louise C
Hemingway, Janet
Ranson, Hilary
The Anopheles gambiae glutathione transferase supergene family: annotation, phylogeny and expression profiles
title The Anopheles gambiae glutathione transferase supergene family: annotation, phylogeny and expression profiles
title_full The Anopheles gambiae glutathione transferase supergene family: annotation, phylogeny and expression profiles
title_fullStr The Anopheles gambiae glutathione transferase supergene family: annotation, phylogeny and expression profiles
title_full_unstemmed The Anopheles gambiae glutathione transferase supergene family: annotation, phylogeny and expression profiles
title_short The Anopheles gambiae glutathione transferase supergene family: annotation, phylogeny and expression profiles
title_sort anopheles gambiae glutathione transferase supergene family: annotation, phylogeny and expression profiles
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC194574/
https://www.ncbi.nlm.nih.gov/pubmed/12914673
http://dx.doi.org/10.1186/1471-2164-4-35
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