Cargando…

Genetic control of the innate immune response

BACKGROUND: Susceptibility to infectious diseases is directed, in part, by the interaction between the invading pathogen and host macrophages. This study examines the influence of genetic background on host-pathogen interactions, by assessing the transcriptional responses of macrophages from five in...

Descripción completa

Detalles Bibliográficos
Autores principales:	Wells, Christine A, Ravasi, Timothy, Faulkner, Geoffrey J, Carninci, Piero, Okazaki, Yasushi, Hayashizaki, Yoshihide, Sweet, Matthew, Wainwright, Brandon J, Hume, David A
Formato:	Texto
Lenguaje:	English
Publicado:	BioMed Central 2003
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC194878/ https://www.ncbi.nlm.nih.gov/pubmed/12826024 http://dx.doi.org/10.1186/1471-2172-4-5

Ejemplares similares

Genome Network and FANTOM3: Assessing the Complexity of the Transcriptome
por: Hayashizaki, Yoshihide, et al.
Publicado: (2006)

Analysis of the human monocyte-derived macrophage transcriptome and response to lipopolysaccharide provides new insights into genetic aetiology of inflammatory bowel disease
por: Baillie, J. Kenneth, et al.
Publicado: (2017)

Simplified ontologies allowing comparison of developmental mammalian gene expression
por: Kruger, Adele, et al.
Publicado: (2007)

Beyond the FANTOM4
por: Suzuki, Harukazu, et al.
Publicado: (2010)

MOIRAI: a compact workflow system for CAGE analysis
por: Hasegawa, Akira, et al.
Publicado: (2014)

The FANTOM5 collection, a data series underpinning mammalian transcriptome atlases in diverse cell types
por: Kawaji, Hideya, et al.
Publicado: (2017)

Alternate transcription of the Toll-like receptor signaling cascade
por: Wells, Christine A, et al.
Publicado: (2006)

CAGE-TSSchip: promoter-based expression profiling using the 5'-leading label of capped transcripts
por: Katayama, Shintaro, et al.
Publicado: (2007)

CAGEr: precise TSS data retrieval and high-resolution promoterome mining for integrative analyses
por: Haberle, Vanja, et al.
Publicado: (2015)

Heterotachy in Mammalian Promoter Evolution
por: Taylor, Martin S, et al.
Publicado: (2006)

Comparison of RNA- or LNA-hybrid oligonucleotides in template-switching reactions for high-speed sequencing library preparation
por: Harbers, Matthias, et al.
Publicado: (2013)

Genome-wide review of transcriptional complexity in mouse protein kinases and phosphatases
por: Forrest, Alistair RR, et al.
Publicado: (2006)

Transcriptional and structural impact of TATA-initiation site spacing in mammalian core promoters
por: Ponjavic, Jasmina, et al.
Publicado: (2006)

A Method for Similarity Search of Genomic Positional Expression Using CAGE
por: Seno, Shigeto, et al.
Publicado: (2006)

High Sensitivity TSS Prediction: Estimates of Locations Where TSS Cannot Occur
por: Schaefer, Ulf, et al.
Publicado: (2010)

Large-scale clustering of CAGE tag expression data
por: Shimokawa, Kazuro, et al.
Publicado: (2007)

CAGE Basic/Analysis Databases: the CAGE resource for comprehensive promoter analysis
por: Kawaji, Hideya, et al.
Publicado: (2006)

A Simple Physical Model Predicts Small Exon Length Variations
por: Chern, Tzu-Ming, et al.
Publicado: (2006)

The FANTOM web resource: from mammalian transcriptional landscape to its dynamic regulation
por: Kawaji, Hideya, et al.
Publicado: (2009)

NanoCAGE analysis of the mouse olfactory epithelium identifies the expression of vomeronasal receptors and of proximal LINE elements
por: Pascarella, Giovanni, et al.
Publicado: (2014)

Dynamic usage of transcription start sites within core promoters
por: Kawaji, Hideya, et al.
Publicado: (2006)

MicroRNA-27a/b-3p and PPARG regulate SCAMP3 through a feed-forward loop during adipogenesis
por: Kulyté, Agné, et al.
Publicado: (2019)

RECLU: a pipeline to discover reproducible transcriptional start sites and their alternative regulation using capped analysis of gene expression (CAGE)
por: Ohmiya, Hiroko, et al.
Publicado: (2014)

Methods for analyzing deep sequencing expression data: constructing the human and mouse promoterome with deepCAGE data
por: Balwierz, Piotr J, et al.
Publicado: (2009)

Mice and Men: Their Promoter Properties
por: Bajic, Vladimir B, et al.
Publicado: (2006)

Characterization of piRNAs across postnatal development in mouse brain
por: Ghosheh, Yanal, et al.
Publicado: (2016)

Computational promoter analysis of mouse, rat and human antimicrobial peptide-coding genes
por: Brahmachary, Manisha, et al.
Publicado: (2006)

FANTOM4 EdgeExpressDB: an integrated database of promoters, genes, microRNAs, expression dynamics and regulatory interactions
por: Severin, Jessica, et al.
Publicado: (2009)

Comprehensive Characterization of Transcriptional Activity during Influenza A Virus Infection Reveals Biases in Cap-Snatching of Host RNA Sequences
por: Clohisey, Sara, et al.
Publicado: (2020)

Shared activity patterns arising at genetic susceptibility loci reveal underlying genomic and cellular architecture of human disease
por: Baillie, J. Kenneth, et al.
Publicado: (2018)

The Short Non-Coding Transcriptome of the Protozoan Parasite Trypanosoma cruzi
por: Franzén, Oscar, et al.
Publicado: (2011)

Temporal dynamics and transcriptional control using single-cell gene expression analysis
por: Kouno, Tsukasa, et al.
Publicado: (2013)

The Abundance of Short Proteins in the Mammalian Proteome
por: Frith, Martin C, et al.
Publicado: (2006)

The Challenge for Gene Therapy: Innate Immune Response to Adenoviruses
por: Thaci, Bart, et al.
Publicado: (2011)

Differential Use of Signal Peptides and Membrane Domains Is a Common Occurrence in the Protein Output of Transcriptional Units
por: Davis, Melissa J, et al.
Publicado: (2006)

FANTOM5 transcriptome catalog of cellular states based on Semantic MediaWiki
por: Abugessaisa, Imad, et al.
Publicado: (2016)

The frequent evolutionary birth and death of functional promoters in mouse and human
por: Young, Robert S., et al.
Publicado: (2015)

Core promoter structure and genomic context reflect histone 3 lysine 9 acetylation patterns
por: Kratz, Anton, et al.
Publicado: (2010)

Building promoter aware transcriptional regulatory networks using siRNA perturbation and deepCAGE
por: Vitezic, Morana, et al.
Publicado: (2010)

LOCATE: a mouse protein subcellular localization database
por: Fink, J. Lynn, et al.
Publicado: (2006)

Cannot write session to /tmp/vufind_sessions/sess_cnurrv3rcg2htt6en9ae2tvv1g