Cargando…

Combined use of Amplified Fragment Length Polymorphism and IS6110-RFLP in fingerprinting clinical isolates of Mycobacterium tuberculosis from Kerala, South India

BACKGROUND: DNA fingerprinting by IS6110-RFLP has shown a high incidence of Mycobacterium tuberculosis isolates having no and low copies of the insertion sequence in Kerala, South India. Amplified Fragment Length Polymorphism (AFLP) would scan the entire genome rather than a few repetitive elements,...

Descripción completa

Detalles Bibliográficos
Autores principales:	Krishnan, Manju Y, Radhakrishnan, Indulakshmi, Joseph, Biljo V, GK, Madhavi Latha, Kumar R, Ajay, Mundayoor, Sathish
Formato:	Texto
Lenguaje:	English
Publicado:	BioMed Central 2007
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1950308/ https://www.ncbi.nlm.nih.gov/pubmed/17662148 http://dx.doi.org/10.1186/1471-2334-7-86

Ejemplares similares

Identification of moaA3 gene in patient isolates of Mycobacterium tuberculosis in Kerala, which is absent in M. tuberculosis H37Rv and H37Ra
por: Sarojini, Suma, et al.
Publicado: (2005)

Comparative study of RFLP-IS6110 and MIRU-VNTR from Mycobacterium tuberculosis isolated in the state of Minas Gerais, Brazil
por: Augusto, Cláudio José, et al.
Publicado: (2017)

Automated IS6110-based fingerprinting of Mycobacterium tuberculosis: Reaching unprecedented discriminatory power and versatility
por: Dekhil, Naira, et al.
Publicado: (2018)

Suitability of IS6110-RFLP and MIRU-VNTR for Differentiating Spoligotyped Drug-Resistant Mycobacterium tuberculosis Clinical Isolates from Sichuan in China
por: Zheng, Chao, et al.
Publicado: (2014)

Usefulness of 3’- 5’ IS6110-RFLP genotyping and spoligotyping of Mycobacterium tuberculosis isolated in a tertiary hospital: a retrospective study detecting unsuspected epidemiological events
por: de Almeida, Silvia Maria, et al.
Publicado: (2019)

Analysis of sequence diversity among IS6110 sequence of Mycobacterium tuberculosis: possible implications for PCR based detection
por: Sankar, Sathish, et al.
Publicado: (2011)

Molecular Differentiation of Mycobacterium tuberculosis Strains without IS6110 Insertions
por: Lok, Kerry H., et al.
Publicado: (2002)

In-depth Analysis of IS6110 Genomic Variability in the Mycobacterium tuberculosis Complex
por: Comín, Jessica, et al.
Publicado: (2022)

IS6110-Restriction Fragment Length Polymorphism and Spoligotyping Analysis of Mycobacterium tuberculosis Clinical Isolates for Investigating Epidemiologic Distribution in Korea
por: Choi, Go Eun, et al.
Publicado: (2010)

IS6110 Restriction Fragment Length Polymorphism Typing of Drug-resistant Mycobacterium tuberculosis Strains from Northeast South Africa
por: Green, Ezekiel, et al.
Publicado: (2013)

Mycobacterium tuberculosis in Wild Asian Elephants, Southern India
por: Zachariah, Arun, et al.
Publicado: (2017)

Genotyping of Clinical Mycobacterium tuberculosis Isolates Based on IS6110 and MIRU-VNTR Polymorphisms
por: Żaczek, Anna, et al.
Publicado: (2013)

Molecular Typing of Mycobacterium tuberculosis Strains with a Common Two-Band IS6110 Pattern
por: Lok, Kerry H., et al.
Publicado: (2002)

Analysis of IS6110 insertion sites provide a glimpse into genome evolution of Mycobacterium tuberculosis
por: Roychowdhury, Tanmoy, et al.
Publicado: (2015)

Downregulation of vimentin in macrophages infected with live Mycobacterium tuberculosis is mediated by Reactive Oxygen Species
por: Mahesh, P. P., et al.
Publicado: (2016)

Mycobacterium tuberculosis Infection Induces HDAC1-Mediated Suppression of IL-12B Gene Expression in Macrophages
por: Chandran, Aneesh, et al.
Publicado: (2015)

Improved specificity for detection of Mycobacterium bovis in fresh tissues using IS6110 real-time PCR
por: Thacker, Tyler C, et al.
Publicado: (2011)

Simple Detection of the IS6110 Sequence of Mycobacterium tuberculosis Complex in Sputum, Based on PCR with Graphene Oxide
por: Hwang, Sang-Hyun, et al.
Publicado: (2015)

Sensitive detection of the IS6110 sequence of Mycobacterium tuberculosis complex based on PCR-magnetic bead ELISA
por: Kyaw, Soe Paing, et al.
Publicado: (2018)

The Recent-Transmission of Mycobacterium tuberculosis Strains among Iranian and Afghan Relapse Cases: a DNA-fingerprinting using RFLP and spoligotyping
por: Parissa-Farnia, et al.
Publicado: (2008)

IS-seq: a novel high throughput survey of in vivo IS6110 transposition in multiple Mycobacterium tuberculosis genomes
por: Reyes, Alejandro, et al.
Publicado: (2012)

Typing Method for the QUB11a Locus of Mycobacterium tuberculosis: IS6110 Insertions and Tandem Repeat Analysis
por: Maeda-Mitani, Eriko, et al.
Publicado: (2016)

New insights into the transposition mechanisms of IS6110 and its dynamic distribution between Mycobacterium tuberculosis Complex lineages
por: Gonzalo-Asensio, Jesús, et al.
Publicado: (2018)

Optimized Lysis-Extraction Method Combined With IS6110-Amplification for Detection of Mycobacterium tuberculosis in Paucibacillary Sputum Specimens
por: Kolia-Diafouka, Pratt, et al.
Publicado: (2018)

Comparison of an Automated Repetitive Sequence-based PCR Microbial Typing System with IS6110-Restriction Fragment Length Polymorphism for Epidemiologic Investigation of Clinical Mycobacterium tuberculosis Isolates in Korea
por: Jang, Mi Hee, et al.
Publicado: (2011)

Development of a vaccine delivery system using hepatitis B core antigen based VLPs to deliver mycobacterial antigens
por: Dhanasooraj, Dhananjayan, et al.
Publicado: (2012)

Vaccine delivery system for tuberculosis based on nano-sized hepatitis B virus core protein particles
por: Dhanasooraj, Dhananjayan, et al.
Publicado: (2013)

Detection of IS6110 and HupB gene sequences of Mycobacterium tuberculosis and bovis in the aortic tissue of patients with Takayasu’s arteritis
por: Soto, María Elena, et al.
Publicado: (2012)

Mapping IS6110 in high-copy number Mycobacterium tuberculosis strains shows specific insertion points in the Beijing genotype
por: Alonso, Henar, et al.
Publicado: (2013)

Evaluation of six different DNA extraction methods for detection of Mycobacterium tuberculosis by means of PCR-IS6110: preliminary study
por: de Almeida, Isabela Neves, et al.
Publicado: (2013)

Analysis of Mycobacterium africanum in the last 17 years in Aragon identifies a specific location of IS6110 in Lineage 6
por: Comín, Jessica, et al.
Publicado: (2021)

IS6110 Copy Number in Multi-Host Mycobacterium bovis Strains Circulating in Bovine Tuberculosis Endemic French Regions
por: Charles, Ciriac, et al.
Publicado: (2022)

IS900 Restriction Fragment Length Polymorphism (RFLP) Analysis of Mycobacterium avium subsp. paratuberculosis Isolates from Goats and Cattle in Norway
por: Djønne, B, et al.
Publicado: (2005)

Assess drug resistance pattern and genetic profile of Mycobacterium tuberculosis clinical isolates by molecular typing methods using direct repeats and IS6110 in pulmonary tuberculosis cases
por: Kalo, Deepika, et al.
Publicado: (2017)

Differentiation of Mycobacterium tuberculosis complex from non-tubercular mycobacteria by nested multiplex PCR targeting IS6110, MTP40 and 32kD alpha antigen encoding gene fragments
por: Sinha, Pallavi, et al.
Publicado: (2016)

Intragenic Distribution of IS6110 in Clinical Mycobacterium tuberculosis Strains: Bioinformatic Evidence for Gene Disruption Leading to Underdiagnosed Antibiotic Resistance
por: Antoine, Rudy, et al.
Publicado: (2021)

Real-Time PCR Validation for Mycobacterium tuberculosis Complex Detection Targeting IS6110 Directly From Bovine Lymph Nodes
por: Sánchez-Carvajal, José María, et al.
Publicado: (2021)

Evaluation of the IS6110 PCR assay for the rapid diagnosis of tuberculous meningitis
por: Deshpande, Poonam S, et al.
Publicado: (2007)

Testing the Limits of 454 Pyrotag Sequencing: Reproducibility, Quantitative Assessment and Comparison to T-RFLP Fingerprinting of Aquifer Microbes
por: Pilloni, Giovanni, et al.
Publicado: (2012)

Detection of Mycobacterium tuberculosis in extrapulmonary biopsy samples using PCR targeting IS6110, rpoB, and nested-rpoB PCR Cloning
por: Meghdadi, Hossein, et al.
Publicado: (2015)

Cannot write session to /tmp/vufind_sessions/sess_4ihu4h93kqb6po4d3k2q7jcom0