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Chemical accuracy in QM/MM calculations on enzyme-catalysed reactions
Combined quantum mechanics/molecular mechanics (QM/MM) modelling has the potential to answer fundamental questions about enzyme mechanisms and catalysis. Calculations using QM/MM methods can now predict barriers for enzyme-catalysed reactions with unprecedented, near chemical accuracy, i.e. to withi...
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Formato: | Texto |
Lenguaje: | English |
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BioMed Central
2007
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1994064/ https://www.ncbi.nlm.nih.gov/pubmed/17880750 http://dx.doi.org/10.1186/1752-153X-1-19 |
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author | Mulholland, Adrian J |
author_facet | Mulholland, Adrian J |
author_sort | Mulholland, Adrian J |
collection | PubMed |
description | Combined quantum mechanics/molecular mechanics (QM/MM) modelling has the potential to answer fundamental questions about enzyme mechanisms and catalysis. Calculations using QM/MM methods can now predict barriers for enzyme-catalysed reactions with unprecedented, near chemical accuracy, i.e. to within 1 kcal/mol in the best cases. Quantitative predictions from first-principles calculations were only previously possible for very small molecules. At this level, quantitative, reliable predictions can be made about the mechanisms of enzyme-catalysed reactions. This development signals a new era of computational biochemistry. |
format | Text |
id | pubmed-1994064 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2007 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-19940642007-09-25 Chemical accuracy in QM/MM calculations on enzyme-catalysed reactions Mulholland, Adrian J Chem Cent J Commentary Combined quantum mechanics/molecular mechanics (QM/MM) modelling has the potential to answer fundamental questions about enzyme mechanisms and catalysis. Calculations using QM/MM methods can now predict barriers for enzyme-catalysed reactions with unprecedented, near chemical accuracy, i.e. to within 1 kcal/mol in the best cases. Quantitative predictions from first-principles calculations were only previously possible for very small molecules. At this level, quantitative, reliable predictions can be made about the mechanisms of enzyme-catalysed reactions. This development signals a new era of computational biochemistry. BioMed Central 2007-07-05 /pmc/articles/PMC1994064/ /pubmed/17880750 http://dx.doi.org/10.1186/1752-153X-1-19 Text en Copyright © 2007 Mulholland http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( (http://creativecommons.org/licenses/by/2.0) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Commentary Mulholland, Adrian J Chemical accuracy in QM/MM calculations on enzyme-catalysed reactions |
title | Chemical accuracy in QM/MM calculations on enzyme-catalysed reactions |
title_full | Chemical accuracy in QM/MM calculations on enzyme-catalysed reactions |
title_fullStr | Chemical accuracy in QM/MM calculations on enzyme-catalysed reactions |
title_full_unstemmed | Chemical accuracy in QM/MM calculations on enzyme-catalysed reactions |
title_short | Chemical accuracy in QM/MM calculations on enzyme-catalysed reactions |
title_sort | chemical accuracy in qm/mm calculations on enzyme-catalysed reactions |
topic | Commentary |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1994064/ https://www.ncbi.nlm.nih.gov/pubmed/17880750 http://dx.doi.org/10.1186/1752-153X-1-19 |
work_keys_str_mv | AT mulhollandadrianj chemicalaccuracyinqmmmcalculationsonenzymecatalysedreactions |