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Chemical accuracy in QM/MM calculations on enzyme-catalysed reactions

Combined quantum mechanics/molecular mechanics (QM/MM) modelling has the potential to answer fundamental questions about enzyme mechanisms and catalysis. Calculations using QM/MM methods can now predict barriers for enzyme-catalysed reactions with unprecedented, near chemical accuracy, i.e. to withi...

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Detalles Bibliográficos
Autor principal: Mulholland, Adrian J
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2007
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1994064/
https://www.ncbi.nlm.nih.gov/pubmed/17880750
http://dx.doi.org/10.1186/1752-153X-1-19
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author Mulholland, Adrian J
author_facet Mulholland, Adrian J
author_sort Mulholland, Adrian J
collection PubMed
description Combined quantum mechanics/molecular mechanics (QM/MM) modelling has the potential to answer fundamental questions about enzyme mechanisms and catalysis. Calculations using QM/MM methods can now predict barriers for enzyme-catalysed reactions with unprecedented, near chemical accuracy, i.e. to within 1 kcal/mol in the best cases. Quantitative predictions from first-principles calculations were only previously possible for very small molecules. At this level, quantitative, reliable predictions can be made about the mechanisms of enzyme-catalysed reactions. This development signals a new era of computational biochemistry.
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spelling pubmed-19940642007-09-25 Chemical accuracy in QM/MM calculations on enzyme-catalysed reactions Mulholland, Adrian J Chem Cent J Commentary Combined quantum mechanics/molecular mechanics (QM/MM) modelling has the potential to answer fundamental questions about enzyme mechanisms and catalysis. Calculations using QM/MM methods can now predict barriers for enzyme-catalysed reactions with unprecedented, near chemical accuracy, i.e. to within 1 kcal/mol in the best cases. Quantitative predictions from first-principles calculations were only previously possible for very small molecules. At this level, quantitative, reliable predictions can be made about the mechanisms of enzyme-catalysed reactions. This development signals a new era of computational biochemistry. BioMed Central 2007-07-05 /pmc/articles/PMC1994064/ /pubmed/17880750 http://dx.doi.org/10.1186/1752-153X-1-19 Text en Copyright © 2007 Mulholland http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( (http://creativecommons.org/licenses/by/2.0) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Commentary
Mulholland, Adrian J
Chemical accuracy in QM/MM calculations on enzyme-catalysed reactions
title Chemical accuracy in QM/MM calculations on enzyme-catalysed reactions
title_full Chemical accuracy in QM/MM calculations on enzyme-catalysed reactions
title_fullStr Chemical accuracy in QM/MM calculations on enzyme-catalysed reactions
title_full_unstemmed Chemical accuracy in QM/MM calculations on enzyme-catalysed reactions
title_short Chemical accuracy in QM/MM calculations on enzyme-catalysed reactions
title_sort chemical accuracy in qm/mm calculations on enzyme-catalysed reactions
topic Commentary
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1994064/
https://www.ncbi.nlm.nih.gov/pubmed/17880750
http://dx.doi.org/10.1186/1752-153X-1-19
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