Graphs in molecular biology

Graph theoretical concepts are useful for the description and analysis of interactions and relationships in biological systems. We give a brief introduction into some of the concepts and their areas of application in molecular biology. We discuss software that is available through the Bioconductor p...

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Detalles Bibliográficos
Autores principales: Huber, Wolfgang, Carey, Vincent J, Long, Li, Falcon, Seth, Gentleman, Robert
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2007
Materias:
Review
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1995545/
https://www.ncbi.nlm.nih.gov/pubmed/17903289
http://dx.doi.org/10.1186/1471-2105-8-S6-S8
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author Huber, Wolfgang
Carey, Vincent J
Long, Li
Falcon, Seth
Gentleman, Robert
author_facet Huber, Wolfgang
Carey, Vincent J
Long, Li
Falcon, Seth
Gentleman, Robert
author_sort Huber, Wolfgang
collection PubMed
description Graph theoretical concepts are useful for the description and analysis of interactions and relationships in biological systems. We give a brief introduction into some of the concepts and their areas of application in molecular biology. We discuss software that is available through the Bioconductor project and present a simple example application to the integration of a protein-protein interaction and a co-expression network.
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spelling pubmed-19955452007-10-02 Graphs in molecular biology Huber, Wolfgang Carey, Vincent J Long, Li Falcon, Seth Gentleman, Robert BMC Bioinformatics Review Graph theoretical concepts are useful for the description and analysis of interactions and relationships in biological systems. We give a brief introduction into some of the concepts and their areas of application in molecular biology. We discuss software that is available through the Bioconductor project and present a simple example application to the integration of a protein-protein interaction and a co-expression network. BioMed Central 2007-09-27 /pmc/articles/PMC1995545/ /pubmed/17903289 http://dx.doi.org/10.1186/1471-2105-8-S6-S8 Text en Copyright © 2007 Huber et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an open access article distributed under the terms of the Creative Commons Attribution License ( (http://creativecommons.org/licenses/by/2.0) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Review
Huber, Wolfgang
Carey, Vincent J
Long, Li
Falcon, Seth
Gentleman, Robert
Graphs in molecular biology
title Graphs in molecular biology
title_full Graphs in molecular biology
title_fullStr Graphs in molecular biology
title_full_unstemmed Graphs in molecular biology
title_short Graphs in molecular biology
title_sort graphs in molecular biology
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1995545/
https://www.ncbi.nlm.nih.gov/pubmed/17903289
http://dx.doi.org/10.1186/1471-2105-8-S6-S8
work_keys_str_mv AT huberwolfgang graphsinmolecularbiology
AT careyvincentj graphsinmolecularbiology
AT longli graphsinmolecularbiology
AT falconseth graphsinmolecularbiology
AT gentlemanrobert graphsinmolecularbiology

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