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Improved Success of Sparse Matrix Protein Crystallization Screening with Heterogeneous Nucleating Agents
BACKGROUND: Crystallization is a major bottleneck in the process of macromolecular structure determination by X-ray crystallography. Successful crystallization requires the formation of nuclei and their subsequent growth to crystals of suitable size. Crystal growth generally occurs spontaneously in...
Autores principales: | , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2007
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2034409/ https://www.ncbi.nlm.nih.gov/pubmed/17971854 http://dx.doi.org/10.1371/journal.pone.0001091 |
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author | Thakur, Anil S. Robin, Gautier Guncar, Gregor Saunders, Neil F. W. Newman, Janet Martin, Jennifer L. Kobe, Bostjan |
author_facet | Thakur, Anil S. Robin, Gautier Guncar, Gregor Saunders, Neil F. W. Newman, Janet Martin, Jennifer L. Kobe, Bostjan |
author_sort | Thakur, Anil S. |
collection | PubMed |
description | BACKGROUND: Crystallization is a major bottleneck in the process of macromolecular structure determination by X-ray crystallography. Successful crystallization requires the formation of nuclei and their subsequent growth to crystals of suitable size. Crystal growth generally occurs spontaneously in a supersaturated solution as a result of homogenous nucleation. However, in a typical sparse matrix screening experiment, precipitant and protein concentration are not sampled extensively, and supersaturation conditions suitable for nucleation are often missed. METHODOLOGY/PRINCIPAL FINDINGS: We tested the effect of nine potential heterogenous nucleating agents on crystallization of ten test proteins in a sparse matrix screen. Several nucleating agents induced crystal formation under conditions where no crystallization occurred in the absence of the nucleating agent. Four nucleating agents: dried seaweed; horse hair; cellulose and hydroxyapatite, had a considerable overall positive effect on crystallization success. This effect was further enhanced when these nucleating agents were used in combination with each other. CONCLUSIONS/SIGNIFICANCE: Our results suggest that the addition of heterogeneous nucleating agents increases the chances of crystal formation when using sparse matrix screens. |
format | Text |
id | pubmed-2034409 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2007 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-20344092007-10-31 Improved Success of Sparse Matrix Protein Crystallization Screening with Heterogeneous Nucleating Agents Thakur, Anil S. Robin, Gautier Guncar, Gregor Saunders, Neil F. W. Newman, Janet Martin, Jennifer L. Kobe, Bostjan PLoS One Research Article BACKGROUND: Crystallization is a major bottleneck in the process of macromolecular structure determination by X-ray crystallography. Successful crystallization requires the formation of nuclei and their subsequent growth to crystals of suitable size. Crystal growth generally occurs spontaneously in a supersaturated solution as a result of homogenous nucleation. However, in a typical sparse matrix screening experiment, precipitant and protein concentration are not sampled extensively, and supersaturation conditions suitable for nucleation are often missed. METHODOLOGY/PRINCIPAL FINDINGS: We tested the effect of nine potential heterogenous nucleating agents on crystallization of ten test proteins in a sparse matrix screen. Several nucleating agents induced crystal formation under conditions where no crystallization occurred in the absence of the nucleating agent. Four nucleating agents: dried seaweed; horse hair; cellulose and hydroxyapatite, had a considerable overall positive effect on crystallization success. This effect was further enhanced when these nucleating agents were used in combination with each other. CONCLUSIONS/SIGNIFICANCE: Our results suggest that the addition of heterogeneous nucleating agents increases the chances of crystal formation when using sparse matrix screens. Public Library of Science 2007-10-31 /pmc/articles/PMC2034409/ /pubmed/17971854 http://dx.doi.org/10.1371/journal.pone.0001091 Text en Thakur et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Thakur, Anil S. Robin, Gautier Guncar, Gregor Saunders, Neil F. W. Newman, Janet Martin, Jennifer L. Kobe, Bostjan Improved Success of Sparse Matrix Protein Crystallization Screening with Heterogeneous Nucleating Agents |
title | Improved Success of Sparse Matrix Protein Crystallization Screening with Heterogeneous Nucleating Agents |
title_full | Improved Success of Sparse Matrix Protein Crystallization Screening with Heterogeneous Nucleating Agents |
title_fullStr | Improved Success of Sparse Matrix Protein Crystallization Screening with Heterogeneous Nucleating Agents |
title_full_unstemmed | Improved Success of Sparse Matrix Protein Crystallization Screening with Heterogeneous Nucleating Agents |
title_short | Improved Success of Sparse Matrix Protein Crystallization Screening with Heterogeneous Nucleating Agents |
title_sort | improved success of sparse matrix protein crystallization screening with heterogeneous nucleating agents |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2034409/ https://www.ncbi.nlm.nih.gov/pubmed/17971854 http://dx.doi.org/10.1371/journal.pone.0001091 |
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