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Conformations of Flanking Bases in HIV-1 RNA DIS Kissing Complexes Studied by Molecular Dynamics

Explicit solvent molecular dynamics simulations (in total almost 800 ns including locally enhanced sampling runs) were applied with different ion conditions and with two force fields (AMBER and CHARMM) to characterize typical geometries adopted by the flanking bases in the RNA kissing-loop complexes...

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Detalles Bibliográficos
Autores principales:	Réblová, Kamila, Fadrná, Eva, Sarzynska, Joanna, Kulinski, Tadeusz, Kulhánek, Petr, Ennifar, Eric, Koča, Jaroslav, Šponer, Jiří
Formato:	Texto
Lenguaje:	English
Publicado:	The Biophysical Society 2007
Materias:	Nucleic Acids
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2099213/ https://www.ncbi.nlm.nih.gov/pubmed/17704156 http://dx.doi.org/10.1529/biophysj.107.110056

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