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Systematics of Hypocrea citrina and related taxa
Morphological studies and phylogenetic analyses of DNA sequences from three genomic regions – the internal transcribed spacer (ITS) regions of the nuclear ribosomal gene repeat, a partial sequence of RNA polymerase II subunit (rpb2), and a partial sequence of translation elongation factor (tef1) – w...
Autores principales: | , , , |
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Formato: | Texto |
Lenguaje: | English |
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CBS Fungal Biodiversity Centre
2006
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2104732/ https://www.ncbi.nlm.nih.gov/pubmed/18490988 http://dx.doi.org/10.3114/sim.2006.56.01 |
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author | Overton, Barrie E. Stewart, Elwin L. Geiser, David M. Jaklitsch, Walter M. |
author_facet | Overton, Barrie E. Stewart, Elwin L. Geiser, David M. Jaklitsch, Walter M. |
author_sort | Overton, Barrie E. |
collection | PubMed |
description | Morphological studies and phylogenetic analyses of DNA sequences from three genomic regions – the internal transcribed spacer (ITS) regions of the nuclear ribosomal gene repeat, a partial sequence of RNA polymerase II subunit (rpb2), and a partial sequence of translation elongation factor (tef1) – were used to investigate the systematics of Hypocrea citrina and related species. A neotype specimen is designated for H. citrina that conforms to Persoon's description of a yellow effuse fungus occurring on leaf litter. Historical information and results obtained in this study provide the foundation for selection of a lectotype specimen from Fries's herbarium for H. lactea. The results indicate that (1) Hypocrea citrina and H. pulvinata are distinct species; (2) H. lactea sensu Fries is a synonym of the older name H. citrina; (3) H. pulvinata, H. protopulvinata, and H. americana are phylogenetically distinct species that form a well-supported polyporicolous clade; (4) H. citrina is situated in a clade closely related to H. pulvinata; and (5) H. microcitrina and H. pseudostraminea reside in a highly supported clade phylogenetically distinct from H. citrina. Hypocrea protopulvinata, H. microcitrina, H. megalocitrina, H. pseudostraminea, and a new species, H. aurantiistroma, are reported and described from North America. Variation in rpb2 and tef1 gene sequences suggests geographical subgroupings between European and North American isolates of H. pulvinata. The phylogenies inferred from ITS, rpb2, and tef1 gene sequences are concordant. Hypocrea citrina var. americana is elevated to species status, Hypocrea americana. |
format | Text |
id | pubmed-2104732 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2006 |
publisher | CBS Fungal Biodiversity Centre |
record_format | MEDLINE/PubMed |
spelling | pubmed-21047322008-04-08 Systematics of Hypocrea citrina and related taxa Overton, Barrie E. Stewart, Elwin L. Geiser, David M. Jaklitsch, Walter M. Stud Mycol Articles Morphological studies and phylogenetic analyses of DNA sequences from three genomic regions – the internal transcribed spacer (ITS) regions of the nuclear ribosomal gene repeat, a partial sequence of RNA polymerase II subunit (rpb2), and a partial sequence of translation elongation factor (tef1) – were used to investigate the systematics of Hypocrea citrina and related species. A neotype specimen is designated for H. citrina that conforms to Persoon's description of a yellow effuse fungus occurring on leaf litter. Historical information and results obtained in this study provide the foundation for selection of a lectotype specimen from Fries's herbarium for H. lactea. The results indicate that (1) Hypocrea citrina and H. pulvinata are distinct species; (2) H. lactea sensu Fries is a synonym of the older name H. citrina; (3) H. pulvinata, H. protopulvinata, and H. americana are phylogenetically distinct species that form a well-supported polyporicolous clade; (4) H. citrina is situated in a clade closely related to H. pulvinata; and (5) H. microcitrina and H. pseudostraminea reside in a highly supported clade phylogenetically distinct from H. citrina. Hypocrea protopulvinata, H. microcitrina, H. megalocitrina, H. pseudostraminea, and a new species, H. aurantiistroma, are reported and described from North America. Variation in rpb2 and tef1 gene sequences suggests geographical subgroupings between European and North American isolates of H. pulvinata. The phylogenies inferred from ITS, rpb2, and tef1 gene sequences are concordant. Hypocrea citrina var. americana is elevated to species status, Hypocrea americana. CBS Fungal Biodiversity Centre 2006 /pmc/articles/PMC2104732/ /pubmed/18490988 http://dx.doi.org/10.3114/sim.2006.56.01 Text en Copyright © Copyright 2006 Centraalbureau voor Schimmelcultures, P.O. Box 85167, 3508 AD Utrecht, The Netherlands. You are free to share–to copy, distribute and transmit the work, under the following conditions: Attribution: You must attribute the work in the manner specified by the author or licensor (but not in any way that suggests that they endorse you or your use of the work). Non-commercial: You may not use this work for commercial purposes. No derivative works: You may not alter, transform, or build upon this work. For any reuse or distribution, you must make clear to others the license terms of this work, which can be found at http://creativecommons.org/licenses/by-nc-nd/3.0/legalcode. (http://creativecommons.org/licenses/by-nc-nd/3.0/legalcode) Any of the above conditions can be waived if you get permission from the copyright holder. Nothing in this license impairs or restricts the author's moral rights. |
spellingShingle | Articles Overton, Barrie E. Stewart, Elwin L. Geiser, David M. Jaklitsch, Walter M. Systematics of Hypocrea citrina and related taxa |
title | Systematics of Hypocrea citrina and related taxa |
title_full | Systematics of Hypocrea citrina and related taxa |
title_fullStr | Systematics of Hypocrea citrina and related taxa |
title_full_unstemmed | Systematics of Hypocrea citrina and related taxa |
title_short | Systematics of Hypocrea citrina and related taxa |
title_sort | systematics of hypocrea citrina and related taxa |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2104732/ https://www.ncbi.nlm.nih.gov/pubmed/18490988 http://dx.doi.org/10.3114/sim.2006.56.01 |
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