Cargando…
Phylogenetic and morphotaxonomic revision of Ramichloridium and allied genera
The phylogeny of the genera Periconiella, Ramichloridium, Rhinocladiella and Veronaea was explored by means of partial sequences of the 28S (LSU) rRNA gene and the ITS region (ITS1, 5.8S rDNA and ITS2). Based on the LSU sequence data, ramichloridium-like species segregate into eight distinct cluster...
Autores principales: | , , , , , |
---|---|
Formato: | Texto |
Lenguaje: | English |
Publicado: |
CBS Fungal Biodiversity Centre
2007
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2104745/ https://www.ncbi.nlm.nih.gov/pubmed/18490996 http://dx.doi.org/10.3114/sim.2007.58.03 |
_version_ | 1782138362060079104 |
---|---|
author | Arzanlou, M. Groenewald, J.Z. Gams, W. Braun, U. Shin, H.-D Crous, P.W. |
author_facet | Arzanlou, M. Groenewald, J.Z. Gams, W. Braun, U. Shin, H.-D Crous, P.W. |
author_sort | Arzanlou, M. |
collection | PubMed |
description | The phylogeny of the genera Periconiella, Ramichloridium, Rhinocladiella and Veronaea was explored by means of partial sequences of the 28S (LSU) rRNA gene and the ITS region (ITS1, 5.8S rDNA and ITS2). Based on the LSU sequence data, ramichloridium-like species segregate into eight distinct clusters. These include the Capnodiales (Mycosphaerellaceae and Teratosphaeriaceae), the Chaetothyriales (Herpotrichiellaceae), the Pleosporales, and five ascomycete clades with uncertain affinities. The type species of Ramichloridium, R. apiculatum, together with R. musae, R. biverticillatum, R. cerophilum, R. verrucosum, R. pini, and three new species isolated from Strelitzia, Musa and forest soil, respectively, reside in the Capnodiales clade. The human-pathogenic species R. mackenziei and R. basitonum, together with R. fasciculatum and R. anceps, cluster with Rhinocladiella (type species: Rh. atrovirens, Herpotrichiellaceae, Chaetothyriales), and are allocated to this genus. Veronaea botryosa, the type species of the genus Veronaea, also resides in the Chaetothyriales clade, whereas Veronaea simplex clusters as a sister taxon to the Venturiaceae (Pleosporales), and is placed in a new genus, Veronaeopsis. Ramichloridium obovoideum clusters with Carpoligna pleurothecii (anamorph: Pleurothecium sp., Chaetosphaeriales), and a new combination is proposed in Pleurothecium. Other ramichloridium-like clades include R. subulatum and R. epichloës (incertae sedis, Sordariomycetes), for which a new genus, Radulidium is erected. Ramichloridium schulzeri and its varieties are placed in a new genus, Myrmecridium (incertae sedis, Sordariomycetes). The genus Pseudovirgaria (incertae sedis) is introduced to accommodate ramichloridium-like isolates occurring on various species of rust fungi. A veronaea-like isolate from Bertia moriformis with phylogenetic affinity to the Annulatascaceae (Sordariomycetidae) is placed in a new genus, Rhodoveronaea. Besides Ramichloridium, Periconiella is also polyphyletic. Thysanorea is introduced to accommodate Periconiella papuana (Herpotrichiellaceae), which is unrelated to the type species, P. velutina (Mycosphaerellaceae). |
format | Text |
id | pubmed-2104745 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2007 |
publisher | CBS Fungal Biodiversity Centre |
record_format | MEDLINE/PubMed |
spelling | pubmed-21047452008-04-08 Phylogenetic and morphotaxonomic revision of Ramichloridium and allied genera Arzanlou, M. Groenewald, J.Z. Gams, W. Braun, U. Shin, H.-D Crous, P.W. Stud Mycol Articles The phylogeny of the genera Periconiella, Ramichloridium, Rhinocladiella and Veronaea was explored by means of partial sequences of the 28S (LSU) rRNA gene and the ITS region (ITS1, 5.8S rDNA and ITS2). Based on the LSU sequence data, ramichloridium-like species segregate into eight distinct clusters. These include the Capnodiales (Mycosphaerellaceae and Teratosphaeriaceae), the Chaetothyriales (Herpotrichiellaceae), the Pleosporales, and five ascomycete clades with uncertain affinities. The type species of Ramichloridium, R. apiculatum, together with R. musae, R. biverticillatum, R. cerophilum, R. verrucosum, R. pini, and three new species isolated from Strelitzia, Musa and forest soil, respectively, reside in the Capnodiales clade. The human-pathogenic species R. mackenziei and R. basitonum, together with R. fasciculatum and R. anceps, cluster with Rhinocladiella (type species: Rh. atrovirens, Herpotrichiellaceae, Chaetothyriales), and are allocated to this genus. Veronaea botryosa, the type species of the genus Veronaea, also resides in the Chaetothyriales clade, whereas Veronaea simplex clusters as a sister taxon to the Venturiaceae (Pleosporales), and is placed in a new genus, Veronaeopsis. Ramichloridium obovoideum clusters with Carpoligna pleurothecii (anamorph: Pleurothecium sp., Chaetosphaeriales), and a new combination is proposed in Pleurothecium. Other ramichloridium-like clades include R. subulatum and R. epichloës (incertae sedis, Sordariomycetes), for which a new genus, Radulidium is erected. Ramichloridium schulzeri and its varieties are placed in a new genus, Myrmecridium (incertae sedis, Sordariomycetes). The genus Pseudovirgaria (incertae sedis) is introduced to accommodate ramichloridium-like isolates occurring on various species of rust fungi. A veronaea-like isolate from Bertia moriformis with phylogenetic affinity to the Annulatascaceae (Sordariomycetidae) is placed in a new genus, Rhodoveronaea. Besides Ramichloridium, Periconiella is also polyphyletic. Thysanorea is introduced to accommodate Periconiella papuana (Herpotrichiellaceae), which is unrelated to the type species, P. velutina (Mycosphaerellaceae). CBS Fungal Biodiversity Centre 2007 /pmc/articles/PMC2104745/ /pubmed/18490996 http://dx.doi.org/10.3114/sim.2007.58.03 Text en Copyright © 2007 CBS Fungal Biodiversity Centre You are free to share–to copy, distribute and transmit the work, under the following conditions: Attribution: You must attribute the work in the manner specified by the author or licensor (but not in any way that suggests that they endorse you or your use of the work). Non-commercial: You may not use this work for commercial purposes. No derivative works: You may not alter, transform, or build upon this work. For any reuse or distribution, you must make clear to others the license terms of this work, which can be found at http://creativecommons.org/licenses/by-nc-nd/3.0/legalcode. Any of the above conditions can be waived if you get permission from the copyright holder. Nothing in this license impairs or restricts the author's moral rights. |
spellingShingle | Articles Arzanlou, M. Groenewald, J.Z. Gams, W. Braun, U. Shin, H.-D Crous, P.W. Phylogenetic and morphotaxonomic revision of Ramichloridium and allied genera |
title | Phylogenetic and morphotaxonomic revision of Ramichloridium and
allied genera |
title_full | Phylogenetic and morphotaxonomic revision of Ramichloridium and
allied genera |
title_fullStr | Phylogenetic and morphotaxonomic revision of Ramichloridium and
allied genera |
title_full_unstemmed | Phylogenetic and morphotaxonomic revision of Ramichloridium and
allied genera |
title_short | Phylogenetic and morphotaxonomic revision of Ramichloridium and
allied genera |
title_sort | phylogenetic and morphotaxonomic revision of ramichloridium and
allied genera |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2104745/ https://www.ncbi.nlm.nih.gov/pubmed/18490996 http://dx.doi.org/10.3114/sim.2007.58.03 |
work_keys_str_mv | AT arzanloum phylogeneticandmorphotaxonomicrevisionoframichloridiumandalliedgenera AT groenewaldjz phylogeneticandmorphotaxonomicrevisionoframichloridiumandalliedgenera AT gamsw phylogeneticandmorphotaxonomicrevisionoframichloridiumandalliedgenera AT braunu phylogeneticandmorphotaxonomicrevisionoframichloridiumandalliedgenera AT shinhd phylogeneticandmorphotaxonomicrevisionoframichloridiumandalliedgenera AT crouspw phylogeneticandmorphotaxonomicrevisionoframichloridiumandalliedgenera |