Cargando…

Gene-interleaving patterns of synteny in the Saccharomyces cerevisiae genome: are they proof of an ancient genome duplication event?

BACKGROUND: Recent comparative genomic studies claim local syntenic gene-interleaving relationships in Ashbya gossypii and Kluyveromyces waltii are compelling evidence for an ancient whole-genome duplication event in Saccharomyces cerevisiae. We here test, using Hannenhalli-Pevzner rearrangement alg...

Descripción completa

Detalles Bibliográficos
Autores principales:	Martin, Nicolas, Ruedi, Elizabeth A, LeDuc, Richard, Sun, Feng-Jie, Caetano-Anollés, Gustavo
Formato:	Texto
Lenguaje:	English
Publicado:	BioMed Central 2007
Materias:	Research
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2134927/ https://www.ncbi.nlm.nih.gov/pubmed/17894859 http://dx.doi.org/10.1186/1745-6150-2-23

Ejemplares similares

Local synteny and codon usage contribute to asymmetric sequence divergence of Saccharomyces cerevisiae gene duplicates
por: Bu, Lijing, et al.
Publicado: (2011)

Genomic Evidence of an Ancient East Asian Divergence Event in Wild Saccharomyces cerevisiae
por: Bendixsen, Devin P, et al.
Publicado: (2021)

Preservation of genetic and regulatory robustness in ancient gene duplicates of Saccharomyces cerevisiae
por: Keane, Orla M., et al.
Publicado: (2014)

Corrigendum to: Genomic Evidence of an Ancient East Asian Divergence Event in Wild Saccharomyces cerevisiae
por: Bendixsen, Devin P, et al.
Publicado: (2021)

Chromosome Duplication in Saccharomyces cerevisiae
por: Bell, Stephen P., et al.
Publicado: (2016)

Adaptive genome duplication affects patterns of molecular evolution in Saccharomyces cerevisiae
por: Fisher, Kaitlin J., et al.
Publicado: (2018)

Genome Duplication Increases Meiotic Recombination Frequency: A Saccharomyces cerevisiae Model
por: Fang, Ou, et al.
Publicado: (2020)

Reconstructing ancestral gene orders with duplications guided by synteny level genome reconstruction
por: Rajaraman, Ashok, et al.
Publicado: (2016)

The Roles of Whole-Genome and Small-Scale Duplications in the Functional Specialization of Saccharomyces cerevisiae Genes
por: Fares, Mario A., et al.
Publicado: (2013)

Duplication processes in Saccharomyces cerevisiae haploid strains
por: Schacherer, Joseph, et al.
Publicado: (2005)

Distinct chromosomal “niches” in the genome of Saccharomyces cerevisiae provide the background for genomic innovation and shape the fate of gene duplicates
por: Stavropoulou, Athanasia, et al.
Publicado: (2022)

The ancient history of the structure of ribonuclease P and the early origins of Archaea
por: Sun, Feng-Jie, et al.
Publicado: (2010)

Piecemeal Buildup of the Genetic Code, Ribosomes, and Genomes from Primordial tRNA Building Blocks
por: Caetano-Anollés, Derek, et al.
Publicado: (2016)

The Network Architecture of the Saccharomyces cerevisiae Genome
por: Hoang, Stephen A., et al.
Publicado: (2013)

Jumbled Genomes: Missing Apicomplexan Synteny
por: DeBarry, Jeremy D., et al.
Publicado: (2011)

Identification of Ohnolog Genes Originating from Whole Genome Duplication in Early Vertebrates, Based on Synteny Comparison across Multiple Genomes
por: Singh, Param Priya, et al.
Publicado: (2015)

The Phenotypic Plasticity of Duplicated Genes in Saccharomyces cerevisiae and the Origin of Adaptations
por: Mattenberger, Florian, et al.
Publicado: (2016)

Autopolyploidy genome duplication preserves other ancient genome duplications in Atlantic salmon (Salmo salar)
por: Christensen, Kris A., et al.
Publicado: (2017)

The evolutionary history of protein fold families and proteomes confirms that the archaeal ancestor is more ancient than the ancestors of other superkingdoms
por: Kim, Kyung Mo, et al.
Publicado: (2012)

Detection and analysis of ancient segmental duplications in mammalian genomes
por: Pu, Lianrong, et al.
Publicado: (2018)

Evidence for an ancient whole genome duplication in the cycad lineage
por: Roodt, Danielle, et al.
Publicado: (2017)

A European Whitefish Linkage Map and Its Implications for Understanding Genome-Wide Synteny Between Salmonids Following Whole Genome Duplication
por: De-Kayne, Rishi, et al.
Publicado: (2018)

A Re-Annotation of the Saccharomyces Cerevisiae Genome
por: Wood, V., et al.
Publicado: (2001)

Genomic Convergence toward Diploidy in Saccharomyces cerevisiae
por: Gerstein, Aleeza C, et al.
Publicado: (2006)

Phylogenetic Portrait of the Saccharomyces cerevisiae Functional Genome
por: Gibney, Patrick A., et al.
Publicado: (2013)

Evolutionary Genomics of Transposable Elements in Saccharomyces cerevisiae
por: Carr, Martin, et al.
Publicado: (2012)

The Reference Genome Sequence of Saccharomyces cerevisiae: Then and Now
por: Engel, Stacia R., et al.
Publicado: (2013)

Population structure of mitochondrial genomes in Saccharomyces cerevisiae
por: Wolters, John F., et al.
Publicado: (2015)

Genomic Analysis of ATP Efflux in Saccharomyces cerevisiae
por: Peters, Theodore W., et al.
Publicado: (2015)

Structured RNAs and synteny regions in the pig genome
por: Anthon, Christian, et al.
Publicado: (2014)

Genome Snapshot: a new resource at the Saccharomyces Genome Database (SGD) presenting an overview of the Saccharomyces cerevisiae genome
por: Hirschman, Jodi E., et al.
Publicado: (2006)

A Plasmodium Whole-Genome Synteny Map: Indels and Synteny Breakpoints as Foci for Species-Specific Genes
por: Kooij, Taco W. A, et al.
Publicado: (2005)

A Phylogenomic Census of Molecular Functions Identifies Modern Thermophilic Archaea as the Most Ancient Form of Cellular Life
por: Nasir, Arshan, et al.
Publicado: (2014)

Population Genomics of Intron Splicing in 38 Saccharomyces cerevisiae Genome Sequences
por: Skelly, Daniel A., et al.
Publicado: (2009)

Bursts of Genomic Instability Potentiate Phenotypic and Genomic Diversification in Saccharomyces cerevisiae
por: Heasley, Lydia R., et al.
Publicado: (2022)

An ancient whole-genome duplication event and its contribution to flavor compounds in the tea plant (Camellia sinensis)
por: Wang, Ya, et al.
Publicado: (2021)

Genome-Wide Analysis of Nascent Transcription in Saccharomyces cerevisiae
por: McKinlay, Anastasia, et al.
Publicado: (2011)

The distribution of inverted repeat sequences in the Saccharomyces cerevisiae genome
por: Strawbridge, Eva M., et al.
Publicado: (2010)

Sequence analysis of origins of replication in the Saccharomyces cerevisiae genomes
por: Li, Wen-Chao, et al.
Publicado: (2014)

The etiology of uracil residues in the Saccharomyces cerevisiae genomic DNA
por: Owiti, Norah, et al.
Publicado: (2018)

Cannot write session to /tmp/vufind_sessions/sess_u2i5e3ag9srdt3al3f88msmetn