ACUA: A software tool for automated codon usage analysis

Currently available codon usage analysis tools lack intuitive graphical user interface and are limited to inbuilt calculations. ACUA (Automated Codon Usage Tool) has been developed to perform high throughput sequence analysis aiding statistical profiling of codon usage. The results of ACUA are prese...

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Detalles Bibliográficos
Autores principales: Vetrivel, Umashankar, Arunkumar, Vijayakumar, Dorairaj, Sudarsanam
Formato: Texto
Lenguaje:English
Publicado: Biomedical Informatics Publishing Group 2007
Materias:
Software
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2174420/
https://www.ncbi.nlm.nih.gov/pubmed/18188422
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author Vetrivel, Umashankar
Arunkumar, Vijayakumar
Dorairaj, Sudarsanam
author_facet Vetrivel, Umashankar
Arunkumar, Vijayakumar
Dorairaj, Sudarsanam
author_sort Vetrivel, Umashankar
collection PubMed
description Currently available codon usage analysis tools lack intuitive graphical user interface and are limited to inbuilt calculations. ACUA (Automated Codon Usage Tool) has been developed to perform high throughput sequence analysis aiding statistical profiling of codon usage. The results of ACUA are presented in a spreadsheet with all perquisite codon usage data required for statistical analysis, displayed in a graphical interface. The package is also capable of on-click sequence retrieval from the results interface, and this feature is unique to ACUA. AVAILABILITY: The package is available for non-commercial purposes and can be downloaded from: http://www.bioinsilico.com/acua.
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spelling pubmed-21744202008-01-10 ACUA: A software tool for automated codon usage analysis Vetrivel, Umashankar Arunkumar, Vijayakumar Dorairaj, Sudarsanam Bioinformation Software Currently available codon usage analysis tools lack intuitive graphical user interface and are limited to inbuilt calculations. ACUA (Automated Codon Usage Tool) has been developed to perform high throughput sequence analysis aiding statistical profiling of codon usage. The results of ACUA are presented in a spreadsheet with all perquisite codon usage data required for statistical analysis, displayed in a graphical interface. The package is also capable of on-click sequence retrieval from the results interface, and this feature is unique to ACUA. AVAILABILITY: The package is available for non-commercial purposes and can be downloaded from: http://www.bioinsilico.com/acua. Biomedical Informatics Publishing Group 2007-10-06 /pmc/articles/PMC2174420/ /pubmed/18188422 Text en © 2007 Biomedical Informatics Publishing Group This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited.
spellingShingle Software
Vetrivel, Umashankar
Arunkumar, Vijayakumar
Dorairaj, Sudarsanam
ACUA: A software tool for automated codon usage analysis
title ACUA: A software tool for automated codon usage analysis
title_full ACUA: A software tool for automated codon usage analysis
title_fullStr ACUA: A software tool for automated codon usage analysis
title_full_unstemmed ACUA: A software tool for automated codon usage analysis
title_short ACUA: A software tool for automated codon usage analysis
title_sort acua: a software tool for automated codon usage analysis
topic Software
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2174420/
https://www.ncbi.nlm.nih.gov/pubmed/18188422
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AT arunkumarvijayakumar acuaasoftwaretoolforautomatedcodonusageanalysis
AT dorairajsudarsanam acuaasoftwaretoolforautomatedcodonusageanalysis

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