Cargando…

Heat-resistant DNA tile arrays constructed by template-directed photoligation through 5-carboxyvinyl-2′-deoxyuridine

Template-directed DNA photoligation has been applied to a method to construct heat-resistant two-dimensional (2D) DNA arrays that can work as scaffolds in bottom-up assembly of functional biomolecules and nano-electronic components. DNA double-crossover AB-staggered (DXAB) tiles were covalently conn...

Descripción completa

Detalles Bibliográficos
Autores principales: Tagawa, Miho, Shohda, Koh-ichiroh, Fujimoto, Kenzo, Sugawara, Tadashi, Suyama, Akira
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2007
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2175349/
https://www.ncbi.nlm.nih.gov/pubmed/17982178
http://dx.doi.org/10.1093/nar/gkm872
_version_ 1782145466841956352
author Tagawa, Miho
Shohda, Koh-ichiroh
Fujimoto, Kenzo
Sugawara, Tadashi
Suyama, Akira
author_facet Tagawa, Miho
Shohda, Koh-ichiroh
Fujimoto, Kenzo
Sugawara, Tadashi
Suyama, Akira
author_sort Tagawa, Miho
collection PubMed
description Template-directed DNA photoligation has been applied to a method to construct heat-resistant two-dimensional (2D) DNA arrays that can work as scaffolds in bottom-up assembly of functional biomolecules and nano-electronic components. DNA double-crossover AB-staggered (DXAB) tiles were covalently connected by enzyme-free template-directed photoligation, which enables a specific ligation reaction in an extremely tight space and under buffer conditions where no enzymes work efficiently. DNA nanostructures created by self-assembly of the DXAB tiles before and after photoligation have been visualized by high-resolution, tapping mode atomic force microscopy in buffer. The improvement of the heat tolerance of 2D DNA arrays was confirmed by heating and visualizing the DNA nanostructures. The heat-resistant DNA arrays may expand the potential of DNA as functional materials in biotechnology and nanotechnology.
format Text
id pubmed-2175349
institution National Center for Biotechnology Information
language English
publishDate 2007
publisher Oxford University Press
record_format MEDLINE/PubMed
spelling pubmed-21753492008-01-07 Heat-resistant DNA tile arrays constructed by template-directed photoligation through 5-carboxyvinyl-2′-deoxyuridine Tagawa, Miho Shohda, Koh-ichiroh Fujimoto, Kenzo Sugawara, Tadashi Suyama, Akira Nucleic Acids Res Methods Online Template-directed DNA photoligation has been applied to a method to construct heat-resistant two-dimensional (2D) DNA arrays that can work as scaffolds in bottom-up assembly of functional biomolecules and nano-electronic components. DNA double-crossover AB-staggered (DXAB) tiles were covalently connected by enzyme-free template-directed photoligation, which enables a specific ligation reaction in an extremely tight space and under buffer conditions where no enzymes work efficiently. DNA nanostructures created by self-assembly of the DXAB tiles before and after photoligation have been visualized by high-resolution, tapping mode atomic force microscopy in buffer. The improvement of the heat tolerance of 2D DNA arrays was confirmed by heating and visualizing the DNA nanostructures. The heat-resistant DNA arrays may expand the potential of DNA as functional materials in biotechnology and nanotechnology. Oxford University Press 2007-12 2007-11-03 /pmc/articles/PMC2175349/ /pubmed/17982178 http://dx.doi.org/10.1093/nar/gkm872 Text en © 2007 The Author(s) http://creativecommons.org/licenses/by-nc/2.0/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Methods Online
Tagawa, Miho
Shohda, Koh-ichiroh
Fujimoto, Kenzo
Sugawara, Tadashi
Suyama, Akira
Heat-resistant DNA tile arrays constructed by template-directed photoligation through 5-carboxyvinyl-2′-deoxyuridine
title Heat-resistant DNA tile arrays constructed by template-directed photoligation through 5-carboxyvinyl-2′-deoxyuridine
title_full Heat-resistant DNA tile arrays constructed by template-directed photoligation through 5-carboxyvinyl-2′-deoxyuridine
title_fullStr Heat-resistant DNA tile arrays constructed by template-directed photoligation through 5-carboxyvinyl-2′-deoxyuridine
title_full_unstemmed Heat-resistant DNA tile arrays constructed by template-directed photoligation through 5-carboxyvinyl-2′-deoxyuridine
title_short Heat-resistant DNA tile arrays constructed by template-directed photoligation through 5-carboxyvinyl-2′-deoxyuridine
title_sort heat-resistant dna tile arrays constructed by template-directed photoligation through 5-carboxyvinyl-2′-deoxyuridine
topic Methods Online
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2175349/
https://www.ncbi.nlm.nih.gov/pubmed/17982178
http://dx.doi.org/10.1093/nar/gkm872
work_keys_str_mv AT tagawamiho heatresistantdnatilearraysconstructedbytemplatedirectedphotoligationthrough5carboxyvinyl2deoxyuridine
AT shohdakohichiroh heatresistantdnatilearraysconstructedbytemplatedirectedphotoligationthrough5carboxyvinyl2deoxyuridine
AT fujimotokenzo heatresistantdnatilearraysconstructedbytemplatedirectedphotoligationthrough5carboxyvinyl2deoxyuridine
AT sugawaratadashi heatresistantdnatilearraysconstructedbytemplatedirectedphotoligationthrough5carboxyvinyl2deoxyuridine
AT suyamaakira heatresistantdnatilearraysconstructedbytemplatedirectedphotoligationthrough5carboxyvinyl2deoxyuridine