Cargando…

Evolutionary history of bacteriophages with double-stranded DNA genomes

BACKGROUND: Reconstruction of evolutionary history of bacteriophages is a difficult problem because of fast sequence drift and lack of omnipresent genes in phage genomes. Moreover, losses and recombinational exchanges of genes are so pervasive in phages that the plausibility of phylogenetic inferenc...

Descripción completa

Detalles Bibliográficos
Autores principales:	Glazko, Galina, Makarenkov, Vladimir, Liu, Jing, Mushegian, Arcady
Formato:	Texto
Lenguaje:	English
Publicado:	BioMed Central 2007
Materias:	Research
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2222618/ https://www.ncbi.nlm.nih.gov/pubmed/18062816 http://dx.doi.org/10.1186/1745-6150-2-36

Ejemplares similares

Similarity searches in genome-wide numerical data sets
por: Glazko, Galina, et al.
Publicado: (2006)

Measuring gene expression divergence: the distance to keep
por: Glazko, Galina, et al.
Publicado: (2010)

Detection of evolutionarily stable fragments of cellular pathways by hierarchical clustering of phyletic patterns
por: Glazko, Galina V, et al.
Publicado: (2004)

Evolutionary perspective on innate immune recognition
por: Mushegian, Arcady, et al.
Publicado: (2001)

The Sad1-UNC-84 homology domain in Mps3 interacts with Mps2 to connect the spindle pole body with the nuclear envelope
por: Jaspersen, Sue L., et al.
Publicado: (2006)

Natural history of S-adenosylmethionine-binding proteins
por: Kozbial, Piotr Z, et al.
Publicado: (2005)

Changes in the composition of the RNA virome mark evolutionary transitions in green plants
por: Mushegian, Arcady, et al.
Publicado: (2016)

Systems biology of bacteriophage proteins and new dimensions of the virus world discovered through metagenomics
por: Kristensen, David M, et al.
Publicado: (2011)

Getting Ready for the Era of Comparative Genomics: The Importance of Viruses
por: Mushegian, Arcady R.
Publicado: (2007)

An ancient evolutionary connection between Ribonuclease A and EndoU families
por: Mushegian, Arcady, et al.
Publicado: (2020)

Inferring explicit weighted consensus networks to represent alternative evolutionary histories
por: Layeghifard, Mehdi, et al.
Publicado: (2013)

Evolutionary History of Bacteriophages in the Genus Paraburkholderia
por: Pratama, Akbar Adjie, et al.
Publicado: (2018)

Evolution of double-stranded DNA viruses of eukaryotes: from bacteriophages to transposons to giant viruses
por: Koonin, Eugene V, et al.
Publicado: (2015)

Grand Challenges in Bioinformatics and Computational Biology
por: Mushegian, Arcady
Publicado: (2011)

Methyltransferases of Riboviria
por: Mushegian, Arcady
Publicado: (2022)

Characterization of the first double-stranded RNA bacteriophage infecting Pseudomonas aeruginosa
por: Yang, Yuhui, et al.
Publicado: (2016)

Rotational restriction of nascent peptides as an essential element of co-translational protein folding: possible molecular players and structural consequences
por: Sorokina, Irina, et al.
Publicado: (2017)

Corrigendum: Characterization of the first double-stranded RNA bacteriophage infecting Pseudomonas aeruginosa
por: Yang, Yuhui, et al.
Publicado: (2017)

Using Time-Structured Data to Estimate Evolutionary Rates of Double-Stranded DNA Viruses
por: Firth, Cadhla, et al.
Publicado: (2010)

A topological algorithm for identification of structural domains of proteins
por: Emmert-Streib, Frank, et al.
Publicado: (2007)

The role of the backbone torsion in protein folding
por: Sorokina, Irina, et al.
Publicado: (2016)

Modeling protein folding in vivo
por: Sorokina, Irina, et al.
Publicado: (2018)

Florigen and its homologs of FT/CETS/PEBP/RKIP/YbhB family may be the enzymes of small molecule metabolism: review of the evidence
por: Tsoy, Olga, et al.
Publicado: (2022)

The Fitness Effects of Random Mutations in Single-Stranded DNA and RNA Bacteriophages
por: Domingo-Calap, Pilar, et al.
Publicado: (2009)

Chordopoxvirus protein F12 implicated in enveloped virion morphogenesis is an inactivated DNA polymerase
por: Yutin, Natalya, et al.
Publicado: (2014)

First‐in‐human application of double‐stranded RNA bacteriophage in the treatment of pulmonary Pseudomonas aeruginosa infection
por: Li, Linlin, et al.
Publicado: (2023)

Revolving hexameric ATPases as asymmetric motors to translocate double-stranded DNA genome along one strand
por: Bohmer, Margaret, et al.
Publicado: (2023)

Minimal genome encoding proteins with constrained amino acid repertoire
por: Tsoy, Olga, et al.
Publicado: (2013)

RNAs That Behave Like Prions
por: Mushegian, Arcady R., et al.
Publicado: (2020)

Double‐Strand Breaks in Genome‐Sized DNA Caused by Ultrasound
por: Kubota, Rinko, et al.
Publicado: (2017)

Models of gene gain and gene loss for probabilistic reconstruction of gene content in the last universal common ancestor of life
por: Kannan, Lavanya, et al.
Publicado: (2013)

The Origin and Evolution of G Protein-Coupled Receptor Kinases
por: Mushegian, Arcady, et al.
Publicado: (2012)

Energy-dependent protein folding: modeling how a protein folding machine may work
por: Sahakyan, Harutyun, et al.
Publicado: (2021)

Identification of single-stranded and double-stranded dna binding proteins based on protein structure
por: Wang, Wei, et al.
Publicado: (2014)

Analysis of Guanine Oxidation Products in Double-Stranded DNA and Proposed Guanine Oxidation Pathways in Single-Stranded, Double-Stranded or Quadruplex DNA
por: Morikawa, Masayuki, et al.
Publicado: (2014)

Sequence analysis of malacoherpesvirus proteins: Pan-herpesvirus capsid module and replication enzymes with an ancient connection to “Megavirales”
por: Mushegian, Arcady, et al.
Publicado: (2018)

Production of Double-stranded DNA Ministrings
por: Wong, Shirley, et al.
Publicado: (2016)

Genome plasticity is governed by double strand break DNA repair in Streptomyces
por: Hoff, Grégory, et al.
Publicado: (2018)

Excess Single-Stranded DNA Inhibits Meiotic Double-Strand Break Repair
por: Johnson, Rebecca, et al.
Publicado: (2007)

Coordinated Binding of Single-Stranded and Double-Stranded DNA by UvsX Recombinase
por: Maher, Robyn L., et al.
Publicado: (2013)

Cannot write session to /tmp/vufind_sessions/sess_q6kavmjn5mknd6r30h9pishhhd