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Microarray analysis in B cells among siblings with/without MS - role for transcription factor TCF2

BACKGROUND: We investigated if global gene expression and transcription networks in B-lymphocytes of siblings with multiple sclerosis (MS) were different from healthy siblings. RESULTS: Using virus-transformed immortalized B cells and human whole genome bioarrays with validation using RT-qPCR, we fo...

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Autores principales: Avasarala, Jagannadha R, Chittur, Sridar V, George, Ajish D, Tine, John A
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2008
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2227948/
https://www.ncbi.nlm.nih.gov/pubmed/18237449
http://dx.doi.org/10.1186/1755-8794-1-2
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author Avasarala, Jagannadha R
Chittur, Sridar V
George, Ajish D
Tine, John A
author_facet Avasarala, Jagannadha R
Chittur, Sridar V
George, Ajish D
Tine, John A
author_sort Avasarala, Jagannadha R
collection PubMed
description BACKGROUND: We investigated if global gene expression and transcription networks in B-lymphocytes of siblings with multiple sclerosis (MS) were different from healthy siblings. RESULTS: Using virus-transformed immortalized B cells and human whole genome bioarrays with validation using RT-qPCR, we found that in siblings with MS, genes for CXCL10, serpin B1 and FUT4 were up regulated whereas CDC5L, TNFRSF19 and HLA-DR were down regulated, among others; transcription analysis showed two intersecting clusters of transcriptional factors - the larger, governed by the upregulated transcription factor 2 (TCF2) and the smaller network regulated by the downregulated CDC5L. CONCLUSION: No study has linked TCF2 to MS and to better understand the role of TCF2 in MS, studies in larger cohorts are required.
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spelling pubmed-22279482008-02-20 Microarray analysis in B cells among siblings with/without MS - role for transcription factor TCF2 Avasarala, Jagannadha R Chittur, Sridar V George, Ajish D Tine, John A BMC Med Genomics Research Article BACKGROUND: We investigated if global gene expression and transcription networks in B-lymphocytes of siblings with multiple sclerosis (MS) were different from healthy siblings. RESULTS: Using virus-transformed immortalized B cells and human whole genome bioarrays with validation using RT-qPCR, we found that in siblings with MS, genes for CXCL10, serpin B1 and FUT4 were up regulated whereas CDC5L, TNFRSF19 and HLA-DR were down regulated, among others; transcription analysis showed two intersecting clusters of transcriptional factors - the larger, governed by the upregulated transcription factor 2 (TCF2) and the smaller network regulated by the downregulated CDC5L. CONCLUSION: No study has linked TCF2 to MS and to better understand the role of TCF2 in MS, studies in larger cohorts are required. BioMed Central 2008-01-31 /pmc/articles/PMC2227948/ /pubmed/18237449 http://dx.doi.org/10.1186/1755-8794-1-2 Text en Copyright © 2008 Chittur et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( (http://creativecommons.org/licenses/by/2.0) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Avasarala, Jagannadha R
Chittur, Sridar V
George, Ajish D
Tine, John A
Microarray analysis in B cells among siblings with/without MS - role for transcription factor TCF2
title Microarray analysis in B cells among siblings with/without MS - role for transcription factor TCF2
title_full Microarray analysis in B cells among siblings with/without MS - role for transcription factor TCF2
title_fullStr Microarray analysis in B cells among siblings with/without MS - role for transcription factor TCF2
title_full_unstemmed Microarray analysis in B cells among siblings with/without MS - role for transcription factor TCF2
title_short Microarray analysis in B cells among siblings with/without MS - role for transcription factor TCF2
title_sort microarray analysis in b cells among siblings with/without ms - role for transcription factor tcf2
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2227948/
https://www.ncbi.nlm.nih.gov/pubmed/18237449
http://dx.doi.org/10.1186/1755-8794-1-2
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