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Microarray analysis in B cells among siblings with/without MS - role for transcription factor TCF2
BACKGROUND: We investigated if global gene expression and transcription networks in B-lymphocytes of siblings with multiple sclerosis (MS) were different from healthy siblings. RESULTS: Using virus-transformed immortalized B cells and human whole genome bioarrays with validation using RT-qPCR, we fo...
Autores principales: | , , , |
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Formato: | Texto |
Lenguaje: | English |
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BioMed Central
2008
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2227948/ https://www.ncbi.nlm.nih.gov/pubmed/18237449 http://dx.doi.org/10.1186/1755-8794-1-2 |
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author | Avasarala, Jagannadha R Chittur, Sridar V George, Ajish D Tine, John A |
author_facet | Avasarala, Jagannadha R Chittur, Sridar V George, Ajish D Tine, John A |
author_sort | Avasarala, Jagannadha R |
collection | PubMed |
description | BACKGROUND: We investigated if global gene expression and transcription networks in B-lymphocytes of siblings with multiple sclerosis (MS) were different from healthy siblings. RESULTS: Using virus-transformed immortalized B cells and human whole genome bioarrays with validation using RT-qPCR, we found that in siblings with MS, genes for CXCL10, serpin B1 and FUT4 were up regulated whereas CDC5L, TNFRSF19 and HLA-DR were down regulated, among others; transcription analysis showed two intersecting clusters of transcriptional factors - the larger, governed by the upregulated transcription factor 2 (TCF2) and the smaller network regulated by the downregulated CDC5L. CONCLUSION: No study has linked TCF2 to MS and to better understand the role of TCF2 in MS, studies in larger cohorts are required. |
format | Text |
id | pubmed-2227948 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2008 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-22279482008-02-20 Microarray analysis in B cells among siblings with/without MS - role for transcription factor TCF2 Avasarala, Jagannadha R Chittur, Sridar V George, Ajish D Tine, John A BMC Med Genomics Research Article BACKGROUND: We investigated if global gene expression and transcription networks in B-lymphocytes of siblings with multiple sclerosis (MS) were different from healthy siblings. RESULTS: Using virus-transformed immortalized B cells and human whole genome bioarrays with validation using RT-qPCR, we found that in siblings with MS, genes for CXCL10, serpin B1 and FUT4 were up regulated whereas CDC5L, TNFRSF19 and HLA-DR were down regulated, among others; transcription analysis showed two intersecting clusters of transcriptional factors - the larger, governed by the upregulated transcription factor 2 (TCF2) and the smaller network regulated by the downregulated CDC5L. CONCLUSION: No study has linked TCF2 to MS and to better understand the role of TCF2 in MS, studies in larger cohorts are required. BioMed Central 2008-01-31 /pmc/articles/PMC2227948/ /pubmed/18237449 http://dx.doi.org/10.1186/1755-8794-1-2 Text en Copyright © 2008 Chittur et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( (http://creativecommons.org/licenses/by/2.0) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Avasarala, Jagannadha R Chittur, Sridar V George, Ajish D Tine, John A Microarray analysis in B cells among siblings with/without MS - role for transcription factor TCF2 |
title | Microarray analysis in B cells among siblings with/without MS - role for transcription factor TCF2 |
title_full | Microarray analysis in B cells among siblings with/without MS - role for transcription factor TCF2 |
title_fullStr | Microarray analysis in B cells among siblings with/without MS - role for transcription factor TCF2 |
title_full_unstemmed | Microarray analysis in B cells among siblings with/without MS - role for transcription factor TCF2 |
title_short | Microarray analysis in B cells among siblings with/without MS - role for transcription factor TCF2 |
title_sort | microarray analysis in b cells among siblings with/without ms - role for transcription factor tcf2 |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2227948/ https://www.ncbi.nlm.nih.gov/pubmed/18237449 http://dx.doi.org/10.1186/1755-8794-1-2 |
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