Remediation of the protein data bank archive

The Worldwide Protein Data Bank (wwPDB; wwpdb.org) is the international collaboration that manages the deposition, processing and distribution of the PDB archive. The online PDB archive at ftp://ftp.wwpdb.org is the repository for the coordinates and related information for more than 47 000 structur...

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Detalles Bibliográficos
Autores principales: Henrick, Kim, Feng, Zukang, Bluhm, Wolfgang F., Dimitropoulos, Dimitris, Doreleijers, Jurgen F., Dutta, Shuchismita, Flippen-Anderson, Judith L., Ionides, John, Kamada, Chisa, Krissinel, Eugene, Lawson, Catherine L., Markley, John L., Nakamura, Haruki, Newman, Richard, Shimizu, Yukiko, Swaminathan, Jawahar, Velankar, Sameer, Ory, Jeramia, Ulrich, Eldon L., Vranken, Wim, Westbrook, John, Yamashita, Reiko, Yang, Huanwang, Young, Jasmine, Yousufuddin, Muhammed, Berman, Helen M.
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2008
Materias:
Articles
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2238854/
https://www.ncbi.nlm.nih.gov/pubmed/18073189
http://dx.doi.org/10.1093/nar/gkm937
Descripción
Sumario:The Worldwide Protein Data Bank (wwPDB; wwpdb.org) is the international collaboration that manages the deposition, processing and distribution of the PDB archive. The online PDB archive at ftp://ftp.wwpdb.org is the repository for the coordinates and related information for more than 47 000 structures, including proteins, nucleic acids and large macromolecular complexes that have been determined using X-ray crystallography, NMR and electron microscopy techniques. The members of the wwPDB–RCSB PDB (USA), MSD-EBI (Europe), PDBj (Japan) and BMRB (USA)–have remediated this archive to address inconsistencies that have been introduced over the years. The scope and methods used in this project are presented.

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