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The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions

The integrated microbial genomes (IMG) system is a data management, analysis and annotation platform for all publicly available genomes. IMG contains both draft and complete JGI microbial genomes integrated with all other publicly available genomes from all three domains of life, together with a lar...

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Autores principales: Markowitz, Victor M., Szeto, Ernest, Palaniappan, Krishna, Grechkin, Yuri, Chu, Ken, Chen, I-Min A., Dubchak, Inna, Anderson, Iain, Lykidis, Athanasios, Mavromatis, Konstantinos, Ivanova, Natalia N., Kyrpides, Nikos C.
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2008
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2238897/
https://www.ncbi.nlm.nih.gov/pubmed/17933782
http://dx.doi.org/10.1093/nar/gkm846
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author Markowitz, Victor M.
Szeto, Ernest
Palaniappan, Krishna
Grechkin, Yuri
Chu, Ken
Chen, I-Min A.
Dubchak, Inna
Anderson, Iain
Lykidis, Athanasios
Mavromatis, Konstantinos
Ivanova, Natalia N.
Kyrpides, Nikos C.
author_facet Markowitz, Victor M.
Szeto, Ernest
Palaniappan, Krishna
Grechkin, Yuri
Chu, Ken
Chen, I-Min A.
Dubchak, Inna
Anderson, Iain
Lykidis, Athanasios
Mavromatis, Konstantinos
Ivanova, Natalia N.
Kyrpides, Nikos C.
author_sort Markowitz, Victor M.
collection PubMed
description The integrated microbial genomes (IMG) system is a data management, analysis and annotation platform for all publicly available genomes. IMG contains both draft and complete JGI microbial genomes integrated with all other publicly available genomes from all three domains of life, together with a large number of plasmids and viruses. IMG provides tools and viewers for analyzing and annotating genomes, genes and functions, individually or in a comparative context. Since its first release in 2005, IMG's data content and analytical capabilities have been constantly expanded through quarterly releases. IMG is provided by the DOE-Joint Genome Institute (JGI) and is available from http://img.jgi.doe.gov.
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spelling pubmed-22388972008-02-12 The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions Markowitz, Victor M. Szeto, Ernest Palaniappan, Krishna Grechkin, Yuri Chu, Ken Chen, I-Min A. Dubchak, Inna Anderson, Iain Lykidis, Athanasios Mavromatis, Konstantinos Ivanova, Natalia N. Kyrpides, Nikos C. Nucleic Acids Res Articles The integrated microbial genomes (IMG) system is a data management, analysis and annotation platform for all publicly available genomes. IMG contains both draft and complete JGI microbial genomes integrated with all other publicly available genomes from all three domains of life, together with a large number of plasmids and viruses. IMG provides tools and viewers for analyzing and annotating genomes, genes and functions, individually or in a comparative context. Since its first release in 2005, IMG's data content and analytical capabilities have been constantly expanded through quarterly releases. IMG is provided by the DOE-Joint Genome Institute (JGI) and is available from http://img.jgi.doe.gov. Oxford University Press 2008-01 2007-10-12 /pmc/articles/PMC2238897/ /pubmed/17933782 http://dx.doi.org/10.1093/nar/gkm846 Text en © 2007 The Author(s) http://creativecommons.org/licenses/by-nc/2.0/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Markowitz, Victor M.
Szeto, Ernest
Palaniappan, Krishna
Grechkin, Yuri
Chu, Ken
Chen, I-Min A.
Dubchak, Inna
Anderson, Iain
Lykidis, Athanasios
Mavromatis, Konstantinos
Ivanova, Natalia N.
Kyrpides, Nikos C.
The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions
title The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions
title_full The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions
title_fullStr The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions
title_full_unstemmed The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions
title_short The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions
title_sort integrated microbial genomes (img) system in 2007: data content and analysis tool extensions
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2238897/
https://www.ncbi.nlm.nih.gov/pubmed/17933782
http://dx.doi.org/10.1093/nar/gkm846
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