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CORUM: the comprehensive resource of mammalian protein complexes

Protein complexes are key molecular entities that integrate multiple gene products to perform cellular functions. The CORUM (http://mips.gsf.de/genre/proj/corum/index.html) database is a collection of experimentally verified mammalian protein complexes. Information is manually derived by critical re...

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Autores principales: Ruepp, Andreas, Brauner, Barbara, Dunger-Kaltenbach, Irmtraud, Frishman, Goar, Montrone, Corinna, Stransky, Michael, Waegele, Brigitte, Schmidt, Thorsten, Doudieu, Octave Noubibou, Stümpflen, Volker, Mewes, H. Werner
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2008
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2238909/
https://www.ncbi.nlm.nih.gov/pubmed/17965090
http://dx.doi.org/10.1093/nar/gkm936
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author Ruepp, Andreas
Brauner, Barbara
Dunger-Kaltenbach, Irmtraud
Frishman, Goar
Montrone, Corinna
Stransky, Michael
Waegele, Brigitte
Schmidt, Thorsten
Doudieu, Octave Noubibou
Stümpflen, Volker
Mewes, H. Werner
author_facet Ruepp, Andreas
Brauner, Barbara
Dunger-Kaltenbach, Irmtraud
Frishman, Goar
Montrone, Corinna
Stransky, Michael
Waegele, Brigitte
Schmidt, Thorsten
Doudieu, Octave Noubibou
Stümpflen, Volker
Mewes, H. Werner
author_sort Ruepp, Andreas
collection PubMed
description Protein complexes are key molecular entities that integrate multiple gene products to perform cellular functions. The CORUM (http://mips.gsf.de/genre/proj/corum/index.html) database is a collection of experimentally verified mammalian protein complexes. Information is manually derived by critical reading of the scientific literature from expert annotators. Information about protein complexes includes protein complex names, subunits, literature references as well as the function of the complexes. For functional annotation, we use the FunCat catalogue that enables to organize the protein complex space into biologically meaningful subsets. The database contains more than 1750 protein complexes that are built from 2400 different genes, thus representing 12% of the protein-coding genes in human. A web-based system is available to query, view and download the data. CORUM provides a comprehensive dataset of protein complexes for discoveries in systems biology, analyses of protein networks and protein complex-associated diseases. Comparable to the MIPS reference dataset of protein complexes from yeast, CORUM intends to serve as a reference for mammalian protein complexes.
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spelling pubmed-22389092008-02-12 CORUM: the comprehensive resource of mammalian protein complexes Ruepp, Andreas Brauner, Barbara Dunger-Kaltenbach, Irmtraud Frishman, Goar Montrone, Corinna Stransky, Michael Waegele, Brigitte Schmidt, Thorsten Doudieu, Octave Noubibou Stümpflen, Volker Mewes, H. Werner Nucleic Acids Res Articles Protein complexes are key molecular entities that integrate multiple gene products to perform cellular functions. The CORUM (http://mips.gsf.de/genre/proj/corum/index.html) database is a collection of experimentally verified mammalian protein complexes. Information is manually derived by critical reading of the scientific literature from expert annotators. Information about protein complexes includes protein complex names, subunits, literature references as well as the function of the complexes. For functional annotation, we use the FunCat catalogue that enables to organize the protein complex space into biologically meaningful subsets. The database contains more than 1750 protein complexes that are built from 2400 different genes, thus representing 12% of the protein-coding genes in human. A web-based system is available to query, view and download the data. CORUM provides a comprehensive dataset of protein complexes for discoveries in systems biology, analyses of protein networks and protein complex-associated diseases. Comparable to the MIPS reference dataset of protein complexes from yeast, CORUM intends to serve as a reference for mammalian protein complexes. Oxford University Press 2008-01 2007-10-26 /pmc/articles/PMC2238909/ /pubmed/17965090 http://dx.doi.org/10.1093/nar/gkm936 Text en © 2007 The Author(s) http://creativecommons.org/licenses/by-nc/2.0/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Ruepp, Andreas
Brauner, Barbara
Dunger-Kaltenbach, Irmtraud
Frishman, Goar
Montrone, Corinna
Stransky, Michael
Waegele, Brigitte
Schmidt, Thorsten
Doudieu, Octave Noubibou
Stümpflen, Volker
Mewes, H. Werner
CORUM: the comprehensive resource of mammalian protein complexes
title CORUM: the comprehensive resource of mammalian protein complexes
title_full CORUM: the comprehensive resource of mammalian protein complexes
title_fullStr CORUM: the comprehensive resource of mammalian protein complexes
title_full_unstemmed CORUM: the comprehensive resource of mammalian protein complexes
title_short CORUM: the comprehensive resource of mammalian protein complexes
title_sort corum: the comprehensive resource of mammalian protein complexes
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2238909/
https://www.ncbi.nlm.nih.gov/pubmed/17965090
http://dx.doi.org/10.1093/nar/gkm936
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