Gallus GBrowse: a unified genomic database for the chicken

Gallus GBrowse (http://birdbase.net/cgi-bin/gbrowse/gallus/) provides online access to genomic and other information about the chicken, Gallus gallus. The information provided by this resource includes predicted genes and Gene Ontology (GO) terms, links to Gallus In Situ Hybridization Analysis (GEIS...

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Autores principales: Schmidt, Carl J., Romanov, Michael, Ryder, Oliver, Magrini, Vincent, Hickenbotham, Matthew, Glasscock, Jarret, McGrath, Sean, Mardis, Elaine, Stein, Lincoln D.
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2008
Materias:
Articles
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2238981/
https://www.ncbi.nlm.nih.gov/pubmed/17933775
http://dx.doi.org/10.1093/nar/gkm783
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author Schmidt, Carl J.
Romanov, Michael
Ryder, Oliver
Magrini, Vincent
Hickenbotham, Matthew
Glasscock, Jarret
McGrath, Sean
Mardis, Elaine
Stein, Lincoln D.
author_facet Schmidt, Carl J.
Romanov, Michael
Ryder, Oliver
Magrini, Vincent
Hickenbotham, Matthew
Glasscock, Jarret
McGrath, Sean
Mardis, Elaine
Stein, Lincoln D.
author_sort Schmidt, Carl J.
collection PubMed
description Gallus GBrowse (http://birdbase.net/cgi-bin/gbrowse/gallus/) provides online access to genomic and other information about the chicken, Gallus gallus. The information provided by this resource includes predicted genes and Gene Ontology (GO) terms, links to Gallus In Situ Hybridization Analysis (GEISHA), Unigene and Reactome, the genomic positions of chicken genetic markers, SNPs and microarray probes, and mappings from turkey, condor and zebra finch DNA and EST sequences to the chicken genome. We also provide a BLAT server (http://birdbase.net/cgi-bin/webBlat) for matching user-provided sequences to the chicken genome. These tools make the Gallus GBrowse server a valuable resource for researchers seeking genomic information regarding the chicken and other avian species.
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spelling pubmed-22389812008-02-12 Gallus GBrowse: a unified genomic database for the chicken Schmidt, Carl J. Romanov, Michael Ryder, Oliver Magrini, Vincent Hickenbotham, Matthew Glasscock, Jarret McGrath, Sean Mardis, Elaine Stein, Lincoln D. Nucleic Acids Res Articles Gallus GBrowse (http://birdbase.net/cgi-bin/gbrowse/gallus/) provides online access to genomic and other information about the chicken, Gallus gallus. The information provided by this resource includes predicted genes and Gene Ontology (GO) terms, links to Gallus In Situ Hybridization Analysis (GEISHA), Unigene and Reactome, the genomic positions of chicken genetic markers, SNPs and microarray probes, and mappings from turkey, condor and zebra finch DNA and EST sequences to the chicken genome. We also provide a BLAT server (http://birdbase.net/cgi-bin/webBlat) for matching user-provided sequences to the chicken genome. These tools make the Gallus GBrowse server a valuable resource for researchers seeking genomic information regarding the chicken and other avian species. Oxford University Press 2008-01 2007-10-11 /pmc/articles/PMC2238981/ /pubmed/17933775 http://dx.doi.org/10.1093/nar/gkm783 Text en © 2007 The Author(s) http://creativecommons.org/licenses/by-nc/2.0/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Schmidt, Carl J.
Romanov, Michael
Ryder, Oliver
Magrini, Vincent
Hickenbotham, Matthew
Glasscock, Jarret
McGrath, Sean
Mardis, Elaine
Stein, Lincoln D.
Gallus GBrowse: a unified genomic database for the chicken
title Gallus GBrowse: a unified genomic database for the chicken
title_full Gallus GBrowse: a unified genomic database for the chicken
title_fullStr Gallus GBrowse: a unified genomic database for the chicken
title_full_unstemmed Gallus GBrowse: a unified genomic database for the chicken
title_short Gallus GBrowse: a unified genomic database for the chicken
title_sort gallus gbrowse: a unified genomic database for the chicken
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2238981/
https://www.ncbi.nlm.nih.gov/pubmed/17933775
http://dx.doi.org/10.1093/nar/gkm783
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AT mcgrathsean gallusgbrowseaunifiedgenomicdatabaseforthechicken
AT mardiselaine gallusgbrowseaunifiedgenomicdatabaseforthechicken
AT steinlincolnd gallusgbrowseaunifiedgenomicdatabaseforthechicken

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