Cargando…

e-Fungi: a data resource for comparative analysis of fungal genomes

BACKGROUND: The number of sequenced fungal genomes is ever increasing, with about 200 genomes already fully sequenced or in progress. Only a small percentage of those genomes have been comprehensively studied, for example using techniques from functional genomics. Comparative analysis has proven to...

Descripción completa

Detalles Bibliográficos
Autores principales:	Hedeler, Cornelia, Wong, Han Min, Cornell, Michael J, Alam, Intikhab, Soanes, Darren M, Rattray, Magnus, Hubbard, Simon J, Talbot, Nicholas J, Oliver, Stephen G, Paton, Norman W
Formato:	Texto
Lenguaje:	English
Publicado:	BioMed Central 2007
Materias:	Database
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2242804/ https://www.ncbi.nlm.nih.gov/pubmed/18028535 http://dx.doi.org/10.1186/1471-2164-8-426

Ejemplares similares

Comparative Genome Analysis of Filamentous Fungi Reveals Gene Family Expansions Associated with Fungal Pathogenesis
por: Soanes, Darren M., et al.
Publicado: (2008)

A kingdom-specific protein domain HMM library for improved annotation of fungal genomes
por: Alam, Intikhab, et al.
Publicado: (2007)

Comparative Genome Analysis Reveals an Absence of Leucine-Rich Repeat Pattern-Recognition Receptor Proteins in the Kingdom Fungi
por: Soanes, Darren M., et al.
Publicado: (2010)

FungalRV: adhesin prediction and immunoinformatics portal for human fungal pathogens
por: Chaudhuri, Rupanjali, et al.
Publicado: (2011)

A Relational Database for the Discovery of Genes Encoding Amino Acid Biosynthetic Enzymes in Pathogenic Fungi
por: Giles, Peter F., et al.
Publicado: (2003)

Model-driven user interfaces for bioinformatics data resources: regenerating the wheel as an alternative to reinventing it
por: Garwood, Kevin, et al.
Publicado: (2006)

The Alternaria genomes database: a comprehensive resource for a fungal genus comprised of saprophytes, plant pathogens, and allergenic species
por: Dang, Ha X, et al.
Publicado: (2015)

UFCG: database of universal fungal core genes and pipeline for genome-wide phylogenetic analysis of fungi
por: Kim, Dongwook, et al.
Publicado: (2022)

Fungal Secretome Database: Integrated platform for annotation of fungal secretomes
por: Choi, Jaeyoung, et al.
Publicado: (2010)

PEDRo: A database for storing, searching and disseminating experimental proteomics data
por: Garwood, Kevin, et al.
Publicado: (2004)

YersiniaBase: a genomic resource and analysis platform for comparative analysis of Yersinia
por: Tan, Shi Yang, et al.
Publicado: (2015)

The Hawaiian Algal Database: a laboratory LIMS and online resource for biodiversity data
por: Wang, Norman, et al.
Publicado: (2009)

Fungal cytochrome P450 database
por: Park, Jongsun, et al.
Publicado: (2008)

The Hawaiian Freshwater Algal Database (HfwADB): a laboratory LIMS and online biodiversity resource
por: Sherwood, Alison R, et al.
Publicado: (2012)

PineappleDB: An online pineapple bioinformatics resource
por: Moyle, Richard L, et al.
Publicado: (2005)

Ensembl variation resources
por: Chen, Yuan, et al.
Publicado: (2010)

FUNYBASE: a FUNgal phYlogenomic dataBASE
por: Marthey, Sylvain, et al.
Publicado: (2008)

HelicoBase: a Helicobacter genomic resource and analysis platform
por: Choo, Siew Woh, et al.
Publicado: (2014)

fPoxDB: fungal peroxidase database for comparative genomics
por: Choi, Jaeyoung, et al.
Publicado: (2014)

Online Biomedical Resources for Malaria-Related Red Cell Disorders
por: Piel, Frédéric B, et al.
Publicado: (2013)

HostSeq: a Canadian whole genome sequencing and clinical data resource
por: Yoo, S, et al.
Publicado: (2023)

FUNGIpath: a tool to assess fungal metabolic pathways predicted by orthology
por: Grossetête, Sandrine, et al.
Publicado: (2010)

CerealsDB 2.0: an integrated resource for plant breeders and scientists
por: Wilkinson, Paul A, et al.
Publicado: (2012)

CerealsDB 3.0: expansion of resources and data integration
por: Wilkinson, Paul A., et al.
Publicado: (2016)

RAG: RNA-As-Graphs web resource
por: Fera, Daniela, et al.
Publicado: (2004)

RAG: An update to the RNA-As-Graphs resource
por: Izzo, Joseph A, et al.
Publicado: (2011)

SNUGB: a versatile genome browser supporting comparative and functional fungal genomics
por: Jung, Kyongyong, et al.
Publicado: (2008)

The β‐1,3‐glucanosyltransferases (Gels) affect the structure of the rice blast fungal cell wall during appressorium‐mediated plant infection
por: Samalova, Marketa, et al.
Publicado: (2016)

SGR: an online genomic resource for the woodland strawberry
por: Darwish, Omar, et al.
Publicado: (2013)

The CompTox Chemistry Dashboard: a community data resource for environmental chemistry
por: Williams, Antony J., et al.
Publicado: (2017)

Floral gene resources from basal angiosperms for comparative genomics research
por: Albert, Victor A, et al.
Publicado: (2005)

SignaLink 2 – a signaling pathway resource with multi-layered regulatory networks
por: Fazekas, Dávid, et al.
Publicado: (2013)

diArk – a resource for eukaryotic genome research
por: Odronitz, Florian, et al.
Publicado: (2007)

AphanoDB: a genomic resource for Aphanomyces pathogens
por: Madoui, Mohammed-Amine, et al.
Publicado: (2007)

ZFNGenome: A comprehensive resource for locating zinc finger nuclease target sites in model organisms
por: Reyon, Deepak, et al.
Publicado: (2011)

PCAS – a precomputed proteome annotation database resource
por: Zhang, Yong, et al.
Publicado: (2003)

AgBase: a functional genomics resource for agriculture
por: McCarthy, Fiona M, et al.
Publicado: (2006)

An integrated database for the enhanced identification of silkworm gene resources
por: Kim, ChangKug, et al.
Publicado: (2010)

Oomycete transcriptomics database: A resource for oomycete transcriptomes
por: Tripathy, Sucheta, et al.
Publicado: (2012)

A new and updated resource for codon usage tables
por: Athey, John, et al.
Publicado: (2017)

Cannot write session to /tmp/vufind_sessions/sess_9sb955ep7otk8ghfr53vjsq5dp