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Natural Variation in Arabidopsis thaliana as a Tool for Highlighting Differential Drought Responses
To test whether natural variation in Arabidopsis could be used to dissect out the genetic basis of responses to drought stress, we characterised a number of accessions. Most of the accessions belong to a core collection that was shown to maximise the genetic diversity captured for a given number of...
Autores principales: | , , , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2008
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2246160/ https://www.ncbi.nlm.nih.gov/pubmed/18301780 http://dx.doi.org/10.1371/journal.pone.0001705 |
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author | Bouchabke, Oumaya Chang, Fengqi Simon, Matthieu Voisin, Roger Pelletier, Georges Durand-Tardif, Mylène |
author_facet | Bouchabke, Oumaya Chang, Fengqi Simon, Matthieu Voisin, Roger Pelletier, Georges Durand-Tardif, Mylène |
author_sort | Bouchabke, Oumaya |
collection | PubMed |
description | To test whether natural variation in Arabidopsis could be used to dissect out the genetic basis of responses to drought stress, we characterised a number of accessions. Most of the accessions belong to a core collection that was shown to maximise the genetic diversity captured for a given number of individual accessions in Arabidopsis thaliana. We measured total leaf area (TLA), Electrolyte Leakage (EL), Relative Water Content (RWC), and Cut Rosette Water Loss (CRWL) in control and mild water deficit conditions. A Principal Component Analysis revealed which traits explain most of the variation and showed that some accessions behave differently compared to the others in drought conditions, these included Ita-0, Cvi-0 and Shahdara. This study relied on genetic variation found naturally within the species, in which populations are assumed to be adapted to their environment. Overall, Arabidopsis thaliana showed interesting phenotypic variations in response to mild water deficit that can be exploited to identify genes and alleles important for this complex trait. |
format | Text |
id | pubmed-2246160 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2008 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-22461602008-02-27 Natural Variation in Arabidopsis thaliana as a Tool for Highlighting Differential Drought Responses Bouchabke, Oumaya Chang, Fengqi Simon, Matthieu Voisin, Roger Pelletier, Georges Durand-Tardif, Mylène PLoS One Research Article To test whether natural variation in Arabidopsis could be used to dissect out the genetic basis of responses to drought stress, we characterised a number of accessions. Most of the accessions belong to a core collection that was shown to maximise the genetic diversity captured for a given number of individual accessions in Arabidopsis thaliana. We measured total leaf area (TLA), Electrolyte Leakage (EL), Relative Water Content (RWC), and Cut Rosette Water Loss (CRWL) in control and mild water deficit conditions. A Principal Component Analysis revealed which traits explain most of the variation and showed that some accessions behave differently compared to the others in drought conditions, these included Ita-0, Cvi-0 and Shahdara. This study relied on genetic variation found naturally within the species, in which populations are assumed to be adapted to their environment. Overall, Arabidopsis thaliana showed interesting phenotypic variations in response to mild water deficit that can be exploited to identify genes and alleles important for this complex trait. Public Library of Science 2008-02-27 /pmc/articles/PMC2246160/ /pubmed/18301780 http://dx.doi.org/10.1371/journal.pone.0001705 Text en Bouchabke et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Bouchabke, Oumaya Chang, Fengqi Simon, Matthieu Voisin, Roger Pelletier, Georges Durand-Tardif, Mylène Natural Variation in Arabidopsis thaliana as a Tool for Highlighting Differential Drought Responses |
title | Natural Variation in Arabidopsis thaliana as a Tool for Highlighting Differential Drought Responses |
title_full | Natural Variation in Arabidopsis thaliana as a Tool for Highlighting Differential Drought Responses |
title_fullStr | Natural Variation in Arabidopsis thaliana as a Tool for Highlighting Differential Drought Responses |
title_full_unstemmed | Natural Variation in Arabidopsis thaliana as a Tool for Highlighting Differential Drought Responses |
title_short | Natural Variation in Arabidopsis thaliana as a Tool for Highlighting Differential Drought Responses |
title_sort | natural variation in arabidopsis thaliana as a tool for highlighting differential drought responses |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2246160/ https://www.ncbi.nlm.nih.gov/pubmed/18301780 http://dx.doi.org/10.1371/journal.pone.0001705 |
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