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Natural Variation in Arabidopsis thaliana as a Tool for Highlighting Differential Drought Responses

To test whether natural variation in Arabidopsis could be used to dissect out the genetic basis of responses to drought stress, we characterised a number of accessions. Most of the accessions belong to a core collection that was shown to maximise the genetic diversity captured for a given number of...

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Autores principales: Bouchabke, Oumaya, Chang, Fengqi, Simon, Matthieu, Voisin, Roger, Pelletier, Georges, Durand-Tardif, Mylène
Formato: Texto
Lenguaje:English
Publicado: Public Library of Science 2008
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2246160/
https://www.ncbi.nlm.nih.gov/pubmed/18301780
http://dx.doi.org/10.1371/journal.pone.0001705
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author Bouchabke, Oumaya
Chang, Fengqi
Simon, Matthieu
Voisin, Roger
Pelletier, Georges
Durand-Tardif, Mylène
author_facet Bouchabke, Oumaya
Chang, Fengqi
Simon, Matthieu
Voisin, Roger
Pelletier, Georges
Durand-Tardif, Mylène
author_sort Bouchabke, Oumaya
collection PubMed
description To test whether natural variation in Arabidopsis could be used to dissect out the genetic basis of responses to drought stress, we characterised a number of accessions. Most of the accessions belong to a core collection that was shown to maximise the genetic diversity captured for a given number of individual accessions in Arabidopsis thaliana. We measured total leaf area (TLA), Electrolyte Leakage (EL), Relative Water Content (RWC), and Cut Rosette Water Loss (CRWL) in control and mild water deficit conditions. A Principal Component Analysis revealed which traits explain most of the variation and showed that some accessions behave differently compared to the others in drought conditions, these included Ita-0, Cvi-0 and Shahdara. This study relied on genetic variation found naturally within the species, in which populations are assumed to be adapted to their environment. Overall, Arabidopsis thaliana showed interesting phenotypic variations in response to mild water deficit that can be exploited to identify genes and alleles important for this complex trait.
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spelling pubmed-22461602008-02-27 Natural Variation in Arabidopsis thaliana as a Tool for Highlighting Differential Drought Responses Bouchabke, Oumaya Chang, Fengqi Simon, Matthieu Voisin, Roger Pelletier, Georges Durand-Tardif, Mylène PLoS One Research Article To test whether natural variation in Arabidopsis could be used to dissect out the genetic basis of responses to drought stress, we characterised a number of accessions. Most of the accessions belong to a core collection that was shown to maximise the genetic diversity captured for a given number of individual accessions in Arabidopsis thaliana. We measured total leaf area (TLA), Electrolyte Leakage (EL), Relative Water Content (RWC), and Cut Rosette Water Loss (CRWL) in control and mild water deficit conditions. A Principal Component Analysis revealed which traits explain most of the variation and showed that some accessions behave differently compared to the others in drought conditions, these included Ita-0, Cvi-0 and Shahdara. This study relied on genetic variation found naturally within the species, in which populations are assumed to be adapted to their environment. Overall, Arabidopsis thaliana showed interesting phenotypic variations in response to mild water deficit that can be exploited to identify genes and alleles important for this complex trait. Public Library of Science 2008-02-27 /pmc/articles/PMC2246160/ /pubmed/18301780 http://dx.doi.org/10.1371/journal.pone.0001705 Text en Bouchabke et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Bouchabke, Oumaya
Chang, Fengqi
Simon, Matthieu
Voisin, Roger
Pelletier, Georges
Durand-Tardif, Mylène
Natural Variation in Arabidopsis thaliana as a Tool for Highlighting Differential Drought Responses
title Natural Variation in Arabidopsis thaliana as a Tool for Highlighting Differential Drought Responses
title_full Natural Variation in Arabidopsis thaliana as a Tool for Highlighting Differential Drought Responses
title_fullStr Natural Variation in Arabidopsis thaliana as a Tool for Highlighting Differential Drought Responses
title_full_unstemmed Natural Variation in Arabidopsis thaliana as a Tool for Highlighting Differential Drought Responses
title_short Natural Variation in Arabidopsis thaliana as a Tool for Highlighting Differential Drought Responses
title_sort natural variation in arabidopsis thaliana as a tool for highlighting differential drought responses
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2246160/
https://www.ncbi.nlm.nih.gov/pubmed/18301780
http://dx.doi.org/10.1371/journal.pone.0001705
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