PAZAR: a framework for collection and dissemination of cis-regulatory sequence annotation

PAZAR is an open-access and open-source database of transcription factor and regulatory sequence annotation with associated web interface and programming tools for data submission and extraction. Curated boutique data collections can be maintained and disseminated through the unified schema of the m...

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Autores principales: Portales-Casamar, Elodie, Kirov, Stefan, Lim, Jonathan, Lithwick, Stuart, Swanson, Magdalena I, Ticoll, Amy, Snoddy, Jay, Wasserman, Wyeth W
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2007
Materias:
Software
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2246282/
https://www.ncbi.nlm.nih.gov/pubmed/17916232
http://dx.doi.org/10.1186/gb-2007-8-10-r207
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author Portales-Casamar, Elodie
Kirov, Stefan
Lim, Jonathan
Lithwick, Stuart
Swanson, Magdalena I
Ticoll, Amy
Snoddy, Jay
Wasserman, Wyeth W
author_facet Portales-Casamar, Elodie
Kirov, Stefan
Lim, Jonathan
Lithwick, Stuart
Swanson, Magdalena I
Ticoll, Amy
Snoddy, Jay
Wasserman, Wyeth W
author_sort Portales-Casamar, Elodie
collection PubMed
description PAZAR is an open-access and open-source database of transcription factor and regulatory sequence annotation with associated web interface and programming tools for data submission and extraction. Curated boutique data collections can be maintained and disseminated through the unified schema of the mall-like PAZAR repository. The Pleiades Promoter Project collection of brain-linked regulatory sequences is introduced to demonstrate the depth of annotation possible within PAZAR. PAZAR, located at , is open for business.
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spelling pubmed-22462822008-02-20 PAZAR: a framework for collection and dissemination of cis-regulatory sequence annotation Portales-Casamar, Elodie Kirov, Stefan Lim, Jonathan Lithwick, Stuart Swanson, Magdalena I Ticoll, Amy Snoddy, Jay Wasserman, Wyeth W Genome Biol Software PAZAR is an open-access and open-source database of transcription factor and regulatory sequence annotation with associated web interface and programming tools for data submission and extraction. Curated boutique data collections can be maintained and disseminated through the unified schema of the mall-like PAZAR repository. The Pleiades Promoter Project collection of brain-linked regulatory sequences is introduced to demonstrate the depth of annotation possible within PAZAR. PAZAR, located at , is open for business. BioMed Central 2007 2007-09-28 /pmc/articles/PMC2246282/ /pubmed/17916232 http://dx.doi.org/10.1186/gb-2007-8-10-r207 Text en Copyright © 2007 Portales-Casamar et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an open access article distributed under the terms of the Creative Commons Attribution License ( (http://creativecommons.org/licenses/by/2.0) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Software
Portales-Casamar, Elodie
Kirov, Stefan
Lim, Jonathan
Lithwick, Stuart
Swanson, Magdalena I
Ticoll, Amy
Snoddy, Jay
Wasserman, Wyeth W
PAZAR: a framework for collection and dissemination of cis-regulatory sequence annotation
title PAZAR: a framework for collection and dissemination of cis-regulatory sequence annotation
title_full PAZAR: a framework for collection and dissemination of cis-regulatory sequence annotation
title_fullStr PAZAR: a framework for collection and dissemination of cis-regulatory sequence annotation
title_full_unstemmed PAZAR: a framework for collection and dissemination of cis-regulatory sequence annotation
title_short PAZAR: a framework for collection and dissemination of cis-regulatory sequence annotation
title_sort pazar: a framework for collection and dissemination of cis-regulatory sequence annotation
topic Software
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2246282/
https://www.ncbi.nlm.nih.gov/pubmed/17916232
http://dx.doi.org/10.1186/gb-2007-8-10-r207
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