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Protein evolution by hypermutation and selection in the B cell line DT40

Genome-wide mutations and selection within a population are the basis of natural evolution. A similar process occurs during antibody affinity maturation when immunoglobulin genes are hypermutated and only those B cells which express antibodies of improved antigen-binding specificity are expanded. Pr...

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Autores principales: Arakawa, Hiroshi, Kudo, Hiroaki, Batrak, Vera, Caldwell, Randolph B., Rieger, Michael A., Ellwart, Joachim W., Buerstedde, Jean-Marie
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2008
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2248763/
https://www.ncbi.nlm.nih.gov/pubmed/18073192
http://dx.doi.org/10.1093/nar/gkm616
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author Arakawa, Hiroshi
Kudo, Hiroaki
Batrak, Vera
Caldwell, Randolph B.
Rieger, Michael A.
Ellwart, Joachim W.
Buerstedde, Jean-Marie
author_facet Arakawa, Hiroshi
Kudo, Hiroaki
Batrak, Vera
Caldwell, Randolph B.
Rieger, Michael A.
Ellwart, Joachim W.
Buerstedde, Jean-Marie
author_sort Arakawa, Hiroshi
collection PubMed
description Genome-wide mutations and selection within a population are the basis of natural evolution. A similar process occurs during antibody affinity maturation when immunoglobulin genes are hypermutated and only those B cells which express antibodies of improved antigen-binding specificity are expanded. Protein evolution might be simulated in cell culture, if transgene-specific hypermutation can be combined with the selection of cells carrying beneficial mutations. Here, we describe the optimization of a GFP transgene in the B cell line DT40 by hypermutation and iterative fluorescence activated cell sorting. Artificial evolution in DT40 offers unique advantages and may be easily adapted to other transgenes, if the selection for desirable mutations is feasible.
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spelling pubmed-22487632008-02-21 Protein evolution by hypermutation and selection in the B cell line DT40 Arakawa, Hiroshi Kudo, Hiroaki Batrak, Vera Caldwell, Randolph B. Rieger, Michael A. Ellwart, Joachim W. Buerstedde, Jean-Marie Nucleic Acids Res Methods Online Genome-wide mutations and selection within a population are the basis of natural evolution. A similar process occurs during antibody affinity maturation when immunoglobulin genes are hypermutated and only those B cells which express antibodies of improved antigen-binding specificity are expanded. Protein evolution might be simulated in cell culture, if transgene-specific hypermutation can be combined with the selection of cells carrying beneficial mutations. Here, we describe the optimization of a GFP transgene in the B cell line DT40 by hypermutation and iterative fluorescence activated cell sorting. Artificial evolution in DT40 offers unique advantages and may be easily adapted to other transgenes, if the selection for desirable mutations is feasible. Oxford University Press 2008-01 2007-12-11 /pmc/articles/PMC2248763/ /pubmed/18073192 http://dx.doi.org/10.1093/nar/gkm616 Text en © 2007 The Author(s) http://creativecommons.org/licenses/by-nc/2.0/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Methods Online
Arakawa, Hiroshi
Kudo, Hiroaki
Batrak, Vera
Caldwell, Randolph B.
Rieger, Michael A.
Ellwart, Joachim W.
Buerstedde, Jean-Marie
Protein evolution by hypermutation and selection in the B cell line DT40
title Protein evolution by hypermutation and selection in the B cell line DT40
title_full Protein evolution by hypermutation and selection in the B cell line DT40
title_fullStr Protein evolution by hypermutation and selection in the B cell line DT40
title_full_unstemmed Protein evolution by hypermutation and selection in the B cell line DT40
title_short Protein evolution by hypermutation and selection in the B cell line DT40
title_sort protein evolution by hypermutation and selection in the b cell line dt40
topic Methods Online
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2248763/
https://www.ncbi.nlm.nih.gov/pubmed/18073192
http://dx.doi.org/10.1093/nar/gkm616
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