Cargando…
Protein evolution by hypermutation and selection in the B cell line DT40
Genome-wide mutations and selection within a population are the basis of natural evolution. A similar process occurs during antibody affinity maturation when immunoglobulin genes are hypermutated and only those B cells which express antibodies of improved antigen-binding specificity are expanded. Pr...
Autores principales: | , , , , , , |
---|---|
Formato: | Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2008
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2248763/ https://www.ncbi.nlm.nih.gov/pubmed/18073192 http://dx.doi.org/10.1093/nar/gkm616 |
_version_ | 1782151052228820992 |
---|---|
author | Arakawa, Hiroshi Kudo, Hiroaki Batrak, Vera Caldwell, Randolph B. Rieger, Michael A. Ellwart, Joachim W. Buerstedde, Jean-Marie |
author_facet | Arakawa, Hiroshi Kudo, Hiroaki Batrak, Vera Caldwell, Randolph B. Rieger, Michael A. Ellwart, Joachim W. Buerstedde, Jean-Marie |
author_sort | Arakawa, Hiroshi |
collection | PubMed |
description | Genome-wide mutations and selection within a population are the basis of natural evolution. A similar process occurs during antibody affinity maturation when immunoglobulin genes are hypermutated and only those B cells which express antibodies of improved antigen-binding specificity are expanded. Protein evolution might be simulated in cell culture, if transgene-specific hypermutation can be combined with the selection of cells carrying beneficial mutations. Here, we describe the optimization of a GFP transgene in the B cell line DT40 by hypermutation and iterative fluorescence activated cell sorting. Artificial evolution in DT40 offers unique advantages and may be easily adapted to other transgenes, if the selection for desirable mutations is feasible. |
format | Text |
id | pubmed-2248763 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2008 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-22487632008-02-21 Protein evolution by hypermutation and selection in the B cell line DT40 Arakawa, Hiroshi Kudo, Hiroaki Batrak, Vera Caldwell, Randolph B. Rieger, Michael A. Ellwart, Joachim W. Buerstedde, Jean-Marie Nucleic Acids Res Methods Online Genome-wide mutations and selection within a population are the basis of natural evolution. A similar process occurs during antibody affinity maturation when immunoglobulin genes are hypermutated and only those B cells which express antibodies of improved antigen-binding specificity are expanded. Protein evolution might be simulated in cell culture, if transgene-specific hypermutation can be combined with the selection of cells carrying beneficial mutations. Here, we describe the optimization of a GFP transgene in the B cell line DT40 by hypermutation and iterative fluorescence activated cell sorting. Artificial evolution in DT40 offers unique advantages and may be easily adapted to other transgenes, if the selection for desirable mutations is feasible. Oxford University Press 2008-01 2007-12-11 /pmc/articles/PMC2248763/ /pubmed/18073192 http://dx.doi.org/10.1093/nar/gkm616 Text en © 2007 The Author(s) http://creativecommons.org/licenses/by-nc/2.0/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Methods Online Arakawa, Hiroshi Kudo, Hiroaki Batrak, Vera Caldwell, Randolph B. Rieger, Michael A. Ellwart, Joachim W. Buerstedde, Jean-Marie Protein evolution by hypermutation and selection in the B cell line DT40 |
title | Protein evolution by hypermutation and selection in the B cell line DT40 |
title_full | Protein evolution by hypermutation and selection in the B cell line DT40 |
title_fullStr | Protein evolution by hypermutation and selection in the B cell line DT40 |
title_full_unstemmed | Protein evolution by hypermutation and selection in the B cell line DT40 |
title_short | Protein evolution by hypermutation and selection in the B cell line DT40 |
title_sort | protein evolution by hypermutation and selection in the b cell line dt40 |
topic | Methods Online |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2248763/ https://www.ncbi.nlm.nih.gov/pubmed/18073192 http://dx.doi.org/10.1093/nar/gkm616 |
work_keys_str_mv | AT arakawahiroshi proteinevolutionbyhypermutationandselectioninthebcelllinedt40 AT kudohiroaki proteinevolutionbyhypermutationandselectioninthebcelllinedt40 AT batrakvera proteinevolutionbyhypermutationandselectioninthebcelllinedt40 AT caldwellrandolphb proteinevolutionbyhypermutationandselectioninthebcelllinedt40 AT riegermichaela proteinevolutionbyhypermutationandselectioninthebcelllinedt40 AT ellwartjoachimw proteinevolutionbyhypermutationandselectioninthebcelllinedt40 AT buersteddejeanmarie proteinevolutionbyhypermutationandselectioninthebcelllinedt40 |