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Simulating non-small cell lung cancer with a multiscale agent-based model
BACKGROUND: The epidermal growth factor receptor (EGFR) is frequently overexpressed in many cancers, including non-small cell lung cancer (NSCLC). In silico modeling is considered to be an increasingly promising tool to add useful insights into the dynamics of the EGFR signal transduction pathway. H...
Autores principales: | , , , |
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Formato: | Texto |
Lenguaje: | English |
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BioMed Central
2007
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2259313/ https://www.ncbi.nlm.nih.gov/pubmed/18154660 http://dx.doi.org/10.1186/1742-4682-4-50 |
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author | Wang, Zhihui Zhang, Le Sagotsky, Jonathan Deisboeck, Thomas S |
author_facet | Wang, Zhihui Zhang, Le Sagotsky, Jonathan Deisboeck, Thomas S |
author_sort | Wang, Zhihui |
collection | PubMed |
description | BACKGROUND: The epidermal growth factor receptor (EGFR) is frequently overexpressed in many cancers, including non-small cell lung cancer (NSCLC). In silico modeling is considered to be an increasingly promising tool to add useful insights into the dynamics of the EGFR signal transduction pathway. However, most of the previous modeling work focused on the molecular or the cellular level only, neglecting the crucial feedback between these scales as well as the interaction with the heterogeneous biochemical microenvironment. RESULTS: We developed a multiscale model for investigating expansion dynamics of NSCLC within a two-dimensional in silico microenvironment. At the molecular level, a specific EGFR-ERK intracellular signal transduction pathway was implemented. Dynamical alterations of these molecules were used to trigger phenotypic changes at the cellular level. Examining the relationship between extrinsic ligand concentrations, intrinsic molecular profiles and microscopic patterns, the results confirmed that increasing the amount of available growth factor leads to a spatially more aggressive cancer system. Moreover, for the cell closest to nutrient abundance, a phase-transition emerges where a minimal increase in extrinsic ligand abolishes the proliferative phenotype altogether. CONCLUSION: Our in silico results indicate that in NSCLC, in the presence of a strong extrinsic chemotactic stimulus (and depending on the cell's location) downstream EGFR-ERK signaling may be processed more efficiently, thereby yielding a migration-dominant cell phenotype and overall, an accelerated spatio-temporal expansion rate. |
format | Text |
id | pubmed-2259313 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2007 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-22593132008-03-04 Simulating non-small cell lung cancer with a multiscale agent-based model Wang, Zhihui Zhang, Le Sagotsky, Jonathan Deisboeck, Thomas S Theor Biol Med Model Research BACKGROUND: The epidermal growth factor receptor (EGFR) is frequently overexpressed in many cancers, including non-small cell lung cancer (NSCLC). In silico modeling is considered to be an increasingly promising tool to add useful insights into the dynamics of the EGFR signal transduction pathway. However, most of the previous modeling work focused on the molecular or the cellular level only, neglecting the crucial feedback between these scales as well as the interaction with the heterogeneous biochemical microenvironment. RESULTS: We developed a multiscale model for investigating expansion dynamics of NSCLC within a two-dimensional in silico microenvironment. At the molecular level, a specific EGFR-ERK intracellular signal transduction pathway was implemented. Dynamical alterations of these molecules were used to trigger phenotypic changes at the cellular level. Examining the relationship between extrinsic ligand concentrations, intrinsic molecular profiles and microscopic patterns, the results confirmed that increasing the amount of available growth factor leads to a spatially more aggressive cancer system. Moreover, for the cell closest to nutrient abundance, a phase-transition emerges where a minimal increase in extrinsic ligand abolishes the proliferative phenotype altogether. CONCLUSION: Our in silico results indicate that in NSCLC, in the presence of a strong extrinsic chemotactic stimulus (and depending on the cell's location) downstream EGFR-ERK signaling may be processed more efficiently, thereby yielding a migration-dominant cell phenotype and overall, an accelerated spatio-temporal expansion rate. BioMed Central 2007-12-21 /pmc/articles/PMC2259313/ /pubmed/18154660 http://dx.doi.org/10.1186/1742-4682-4-50 Text en Copyright © 2007 Wang et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( (http://creativecommons.org/licenses/by/2.0) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Wang, Zhihui Zhang, Le Sagotsky, Jonathan Deisboeck, Thomas S Simulating non-small cell lung cancer with a multiscale agent-based model |
title | Simulating non-small cell lung cancer with a multiscale agent-based model |
title_full | Simulating non-small cell lung cancer with a multiscale agent-based model |
title_fullStr | Simulating non-small cell lung cancer with a multiscale agent-based model |
title_full_unstemmed | Simulating non-small cell lung cancer with a multiscale agent-based model |
title_short | Simulating non-small cell lung cancer with a multiscale agent-based model |
title_sort | simulating non-small cell lung cancer with a multiscale agent-based model |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2259313/ https://www.ncbi.nlm.nih.gov/pubmed/18154660 http://dx.doi.org/10.1186/1742-4682-4-50 |
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