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Neural Coding of Natural Stimuli: Information at Sub-Millisecond Resolution

Sensory information about the outside world is encoded by neurons in sequences of discrete, identical pulses termed action potentials or spikes. There is persistent controversy about the extent to which the precise timing of these spikes is relevant to the function of the brain. We revisit this issu...

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Autores principales: Nemenman, Ilya, Lewen, Geoffrey D., Bialek, William, de Ruyter van Steveninck, Rob R.
Formato: Texto
Lenguaje:English
Publicado: Public Library of Science 2008
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2265477/
https://www.ncbi.nlm.nih.gov/pubmed/18369423
http://dx.doi.org/10.1371/journal.pcbi.1000025
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author Nemenman, Ilya
Lewen, Geoffrey D.
Bialek, William
de Ruyter van Steveninck, Rob R.
author_facet Nemenman, Ilya
Lewen, Geoffrey D.
Bialek, William
de Ruyter van Steveninck, Rob R.
author_sort Nemenman, Ilya
collection PubMed
description Sensory information about the outside world is encoded by neurons in sequences of discrete, identical pulses termed action potentials or spikes. There is persistent controversy about the extent to which the precise timing of these spikes is relevant to the function of the brain. We revisit this issue, using the motion-sensitive neurons of the fly visual system as a test case. Our experimental methods allow us to deliver more nearly natural visual stimuli, comparable to those which flies encounter in free, acrobatic flight. New mathematical methods allow us to draw more reliable conclusions about the information content of neural responses even when the set of possible responses is very large. We find that significant amounts of visual information are represented by details of the spike train at millisecond and sub-millisecond precision, even though the sensory input has a correlation time of ∼55 ms; different patterns of spike timing represent distinct motion trajectories, and the absolute timing of spikes points to particular features of these trajectories with high precision. Finally, the efficiency of our entropy estimator makes it possible to uncover features of neural coding relevant for natural visual stimuli: first, the system's information transmission rate varies with natural fluctuations in light intensity, resulting from varying cloud cover, such that marginal increases in information rate thus occur even when the individual photoreceptors are counting on the order of one million photons per second. Secondly, we see that the system exploits the relatively slow dynamics of the stimulus to remove coding redundancy and so generate a more efficient neural code.
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spelling pubmed-22654772008-03-08 Neural Coding of Natural Stimuli: Information at Sub-Millisecond Resolution Nemenman, Ilya Lewen, Geoffrey D. Bialek, William de Ruyter van Steveninck, Rob R. PLoS Comput Biol Research Article Sensory information about the outside world is encoded by neurons in sequences of discrete, identical pulses termed action potentials or spikes. There is persistent controversy about the extent to which the precise timing of these spikes is relevant to the function of the brain. We revisit this issue, using the motion-sensitive neurons of the fly visual system as a test case. Our experimental methods allow us to deliver more nearly natural visual stimuli, comparable to those which flies encounter in free, acrobatic flight. New mathematical methods allow us to draw more reliable conclusions about the information content of neural responses even when the set of possible responses is very large. We find that significant amounts of visual information are represented by details of the spike train at millisecond and sub-millisecond precision, even though the sensory input has a correlation time of ∼55 ms; different patterns of spike timing represent distinct motion trajectories, and the absolute timing of spikes points to particular features of these trajectories with high precision. Finally, the efficiency of our entropy estimator makes it possible to uncover features of neural coding relevant for natural visual stimuli: first, the system's information transmission rate varies with natural fluctuations in light intensity, resulting from varying cloud cover, such that marginal increases in information rate thus occur even when the individual photoreceptors are counting on the order of one million photons per second. Secondly, we see that the system exploits the relatively slow dynamics of the stimulus to remove coding redundancy and so generate a more efficient neural code. Public Library of Science 2008-03-07 /pmc/articles/PMC2265477/ /pubmed/18369423 http://dx.doi.org/10.1371/journal.pcbi.1000025 Text en Nemenman et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Nemenman, Ilya
Lewen, Geoffrey D.
Bialek, William
de Ruyter van Steveninck, Rob R.
Neural Coding of Natural Stimuli: Information at Sub-Millisecond Resolution
title Neural Coding of Natural Stimuli: Information at Sub-Millisecond Resolution
title_full Neural Coding of Natural Stimuli: Information at Sub-Millisecond Resolution
title_fullStr Neural Coding of Natural Stimuli: Information at Sub-Millisecond Resolution
title_full_unstemmed Neural Coding of Natural Stimuli: Information at Sub-Millisecond Resolution
title_short Neural Coding of Natural Stimuli: Information at Sub-Millisecond Resolution
title_sort neural coding of natural stimuli: information at sub-millisecond resolution
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2265477/
https://www.ncbi.nlm.nih.gov/pubmed/18369423
http://dx.doi.org/10.1371/journal.pcbi.1000025
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