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Role of Duplicate Genes in Robustness against Deleterious Human Mutations

It is now widely recognized that robustness is an inherent property of biological systems [1],[2],[3]. The contribution of close sequence homologs to genetic robustness against null mutations has been previously demonstrated in simple organisms [4],[5]. In this paper we investigate in detail the con...

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Autores principales: Hsiao, Tzu-Lin, Vitkup, Dennis
Formato: Texto
Lenguaje:English
Publicado: Public Library of Science 2008
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2265532/
https://www.ncbi.nlm.nih.gov/pubmed/18369440
http://dx.doi.org/10.1371/journal.pgen.1000014
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author Hsiao, Tzu-Lin
Vitkup, Dennis
author_facet Hsiao, Tzu-Lin
Vitkup, Dennis
author_sort Hsiao, Tzu-Lin
collection PubMed
description It is now widely recognized that robustness is an inherent property of biological systems [1],[2],[3]. The contribution of close sequence homologs to genetic robustness against null mutations has been previously demonstrated in simple organisms [4],[5]. In this paper we investigate in detail the contribution of gene duplicates to back-up against deleterious human mutations. Our analysis demonstrates that the functional compensation by close homologs may play an important role in human genetic disease. Genes with a 90% sequence identity homolog are about 3 times less likely to harbor known disease mutations compared to genes with remote homologs. Moreover, close duplicates affect the phenotypic consequences of deleterious mutations by making a decrease in life expectancy significantly less likely. We also demonstrate that similarity of expression profiles across tissues significantly increases the likelihood of functional compensation by homologs.
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spelling pubmed-22655322008-03-14 Role of Duplicate Genes in Robustness against Deleterious Human Mutations Hsiao, Tzu-Lin Vitkup, Dennis PLoS Genet Research Article It is now widely recognized that robustness is an inherent property of biological systems [1],[2],[3]. The contribution of close sequence homologs to genetic robustness against null mutations has been previously demonstrated in simple organisms [4],[5]. In this paper we investigate in detail the contribution of gene duplicates to back-up against deleterious human mutations. Our analysis demonstrates that the functional compensation by close homologs may play an important role in human genetic disease. Genes with a 90% sequence identity homolog are about 3 times less likely to harbor known disease mutations compared to genes with remote homologs. Moreover, close duplicates affect the phenotypic consequences of deleterious mutations by making a decrease in life expectancy significantly less likely. We also demonstrate that similarity of expression profiles across tissues significantly increases the likelihood of functional compensation by homologs. Public Library of Science 2008-03-14 /pmc/articles/PMC2265532/ /pubmed/18369440 http://dx.doi.org/10.1371/journal.pgen.1000014 Text en Hsiao and Vitkup. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Hsiao, Tzu-Lin
Vitkup, Dennis
Role of Duplicate Genes in Robustness against Deleterious Human Mutations
title Role of Duplicate Genes in Robustness against Deleterious Human Mutations
title_full Role of Duplicate Genes in Robustness against Deleterious Human Mutations
title_fullStr Role of Duplicate Genes in Robustness against Deleterious Human Mutations
title_full_unstemmed Role of Duplicate Genes in Robustness against Deleterious Human Mutations
title_short Role of Duplicate Genes in Robustness against Deleterious Human Mutations
title_sort role of duplicate genes in robustness against deleterious human mutations
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2265532/
https://www.ncbi.nlm.nih.gov/pubmed/18369440
http://dx.doi.org/10.1371/journal.pgen.1000014
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