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Role of Duplicate Genes in Robustness against Deleterious Human Mutations
It is now widely recognized that robustness is an inherent property of biological systems [1],[2],[3]. The contribution of close sequence homologs to genetic robustness against null mutations has been previously demonstrated in simple organisms [4],[5]. In this paper we investigate in detail the con...
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Formato: | Texto |
Lenguaje: | English |
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Public Library of Science
2008
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2265532/ https://www.ncbi.nlm.nih.gov/pubmed/18369440 http://dx.doi.org/10.1371/journal.pgen.1000014 |
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author | Hsiao, Tzu-Lin Vitkup, Dennis |
author_facet | Hsiao, Tzu-Lin Vitkup, Dennis |
author_sort | Hsiao, Tzu-Lin |
collection | PubMed |
description | It is now widely recognized that robustness is an inherent property of biological systems [1],[2],[3]. The contribution of close sequence homologs to genetic robustness against null mutations has been previously demonstrated in simple organisms [4],[5]. In this paper we investigate in detail the contribution of gene duplicates to back-up against deleterious human mutations. Our analysis demonstrates that the functional compensation by close homologs may play an important role in human genetic disease. Genes with a 90% sequence identity homolog are about 3 times less likely to harbor known disease mutations compared to genes with remote homologs. Moreover, close duplicates affect the phenotypic consequences of deleterious mutations by making a decrease in life expectancy significantly less likely. We also demonstrate that similarity of expression profiles across tissues significantly increases the likelihood of functional compensation by homologs. |
format | Text |
id | pubmed-2265532 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2008 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-22655322008-03-14 Role of Duplicate Genes in Robustness against Deleterious Human Mutations Hsiao, Tzu-Lin Vitkup, Dennis PLoS Genet Research Article It is now widely recognized that robustness is an inherent property of biological systems [1],[2],[3]. The contribution of close sequence homologs to genetic robustness against null mutations has been previously demonstrated in simple organisms [4],[5]. In this paper we investigate in detail the contribution of gene duplicates to back-up against deleterious human mutations. Our analysis demonstrates that the functional compensation by close homologs may play an important role in human genetic disease. Genes with a 90% sequence identity homolog are about 3 times less likely to harbor known disease mutations compared to genes with remote homologs. Moreover, close duplicates affect the phenotypic consequences of deleterious mutations by making a decrease in life expectancy significantly less likely. We also demonstrate that similarity of expression profiles across tissues significantly increases the likelihood of functional compensation by homologs. Public Library of Science 2008-03-14 /pmc/articles/PMC2265532/ /pubmed/18369440 http://dx.doi.org/10.1371/journal.pgen.1000014 Text en Hsiao and Vitkup. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Hsiao, Tzu-Lin Vitkup, Dennis Role of Duplicate Genes in Robustness against Deleterious Human Mutations |
title | Role of Duplicate Genes in Robustness against Deleterious Human Mutations |
title_full | Role of Duplicate Genes in Robustness against Deleterious Human Mutations |
title_fullStr | Role of Duplicate Genes in Robustness against Deleterious Human Mutations |
title_full_unstemmed | Role of Duplicate Genes in Robustness against Deleterious Human Mutations |
title_short | Role of Duplicate Genes in Robustness against Deleterious Human Mutations |
title_sort | role of duplicate genes in robustness against deleterious human mutations |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2265532/ https://www.ncbi.nlm.nih.gov/pubmed/18369440 http://dx.doi.org/10.1371/journal.pgen.1000014 |
work_keys_str_mv | AT hsiaotzulin roleofduplicategenesinrobustnessagainstdeleterioushumanmutations AT vitkupdennis roleofduplicategenesinrobustnessagainstdeleterioushumanmutations |