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Degradation of 4-fluorophenol by Arthrobacter sp. strain IF1
A Gram-positive bacterial strain capable of aerobic biodegradation of 4-fluorophenol (4-FP) as the sole source of carbon and energy was isolated by selective enrichment from soil samples collected near an industrial site. The organism, designated strain IF1, was identified as a member of the genus A...
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Formato: | Texto |
Lenguaje: | English |
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Springer Berlin Heidelberg
2008
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2266783/ https://www.ncbi.nlm.nih.gov/pubmed/18228015 http://dx.doi.org/10.1007/s00253-008-1343-3 |
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author | Ferreira, Maria Isabel M. Marchesi, Julian R. Janssen, Dick B. |
author_facet | Ferreira, Maria Isabel M. Marchesi, Julian R. Janssen, Dick B. |
author_sort | Ferreira, Maria Isabel M. |
collection | PubMed |
description | A Gram-positive bacterial strain capable of aerobic biodegradation of 4-fluorophenol (4-FP) as the sole source of carbon and energy was isolated by selective enrichment from soil samples collected near an industrial site. The organism, designated strain IF1, was identified as a member of the genus Arthrobacter on the basis of 16S ribosomal RNA gene sequence analysis. Arthrobacter strain IF1 was able to mineralize 4-FP up to concentrations of 5 mM in batch culture. Stoichiometric release of fluoride ions was observed, suggesting that there is no formation of halogenated dead-end products during 4-FP metabolism. The degradative pathway of 4-FP was investigated using enzyme assays and identification of intermediates by gas chromatography (GC), GC–mass spectrometry (MS), high-performance liquid chromatography, and liquid chromatography–MS. Cell-free extracts of 4-FP-grown cells contained no activity for catechol 1,2-dioxygenase or catechol 2,3-dioxygenase, which indicates that the pathway does not proceed through a catechol intermediate. Cells grown on 4-FP oxidized 4-FP, hydroquinone, and hydroxyquinol but not 4-fluorocatechol. During 4-FP metabolism, hydroquinone accumulated as a product. Hydroquinone could be converted to hydroxyquinol, which was further transformed into maleylacetic acid and β-ketoadipic acid. These results indicate that the biodegradation of 4-FP starts with a 4-FP monooxygenase reaction that yields benzoquinone, which is reduced to hydroquinone and further metabolized via the β-ketoadipic acid pathway. |
format | Text |
id | pubmed-2266783 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2008 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-22667832008-03-11 Degradation of 4-fluorophenol by Arthrobacter sp. strain IF1 Ferreira, Maria Isabel M. Marchesi, Julian R. Janssen, Dick B. Appl Microbiol Biotechnol Applied Microbial and Cell Physiology A Gram-positive bacterial strain capable of aerobic biodegradation of 4-fluorophenol (4-FP) as the sole source of carbon and energy was isolated by selective enrichment from soil samples collected near an industrial site. The organism, designated strain IF1, was identified as a member of the genus Arthrobacter on the basis of 16S ribosomal RNA gene sequence analysis. Arthrobacter strain IF1 was able to mineralize 4-FP up to concentrations of 5 mM in batch culture. Stoichiometric release of fluoride ions was observed, suggesting that there is no formation of halogenated dead-end products during 4-FP metabolism. The degradative pathway of 4-FP was investigated using enzyme assays and identification of intermediates by gas chromatography (GC), GC–mass spectrometry (MS), high-performance liquid chromatography, and liquid chromatography–MS. Cell-free extracts of 4-FP-grown cells contained no activity for catechol 1,2-dioxygenase or catechol 2,3-dioxygenase, which indicates that the pathway does not proceed through a catechol intermediate. Cells grown on 4-FP oxidized 4-FP, hydroquinone, and hydroxyquinol but not 4-fluorocatechol. During 4-FP metabolism, hydroquinone accumulated as a product. Hydroquinone could be converted to hydroxyquinol, which was further transformed into maleylacetic acid and β-ketoadipic acid. These results indicate that the biodegradation of 4-FP starts with a 4-FP monooxygenase reaction that yields benzoquinone, which is reduced to hydroquinone and further metabolized via the β-ketoadipic acid pathway. Springer Berlin Heidelberg 2008-03-01 2008 /pmc/articles/PMC2266783/ /pubmed/18228015 http://dx.doi.org/10.1007/s00253-008-1343-3 Text en © The Author(s) 2008 Open AccessThis is an open access article distributed under the terms of the Creative Commons Attribution Noncommercial License (https://creativecommons.org/licenses/by-nc/2.0), which permits any noncommercial use, distribution, and reproduction in any medium, provided the original author(s) and source are credited. |
spellingShingle | Applied Microbial and Cell Physiology Ferreira, Maria Isabel M. Marchesi, Julian R. Janssen, Dick B. Degradation of 4-fluorophenol by Arthrobacter sp. strain IF1 |
title | Degradation of 4-fluorophenol by Arthrobacter sp. strain IF1 |
title_full | Degradation of 4-fluorophenol by Arthrobacter sp. strain IF1 |
title_fullStr | Degradation of 4-fluorophenol by Arthrobacter sp. strain IF1 |
title_full_unstemmed | Degradation of 4-fluorophenol by Arthrobacter sp. strain IF1 |
title_short | Degradation of 4-fluorophenol by Arthrobacter sp. strain IF1 |
title_sort | degradation of 4-fluorophenol by arthrobacter sp. strain if1 |
topic | Applied Microbial and Cell Physiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2266783/ https://www.ncbi.nlm.nih.gov/pubmed/18228015 http://dx.doi.org/10.1007/s00253-008-1343-3 |
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